PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1vhyB_

Fold library id	PDB Header	Molecule	Title
c1vhyB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: hypothetical protein hi0303;	PDBTitle: crystal structure of haemophilus influenzae protein hi0303,2 pfam duf558

Links to external resources
Added to library: Tue Mar 16 13:00:34 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I P R I Y H P I S L E N Q T Q C Y L S E D A A N H V A R V L R X T E G E Q L E L F D G S N H I Y P A K I I V K V E I L G R E L A D K E S H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S
T T T S
T T
S S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K I H L G Q V I S R R X E F T I Q K S V E L G V N V I T P L W S E R C G V K L D A E R X D K K I Q Q W Q K I A I A A C E Q C G R N I V P E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
T T T T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R P L X K L Q D W C A E N D G A L K L N L H P R A H Y S I K T L P T I P A G G V R L L I G S E G G L S A Q E I A Q T E Q Q G F T E I L L G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
T T
S B
T T T
S
T T
T T
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence R V L R T E T A S L A A I S A L Q I C F G D L G E E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	P	R	I	Y	H	P	I	S	L	E	N	Q	T	Q	C	Y	L	S	E	D	A	A	N	H	V	A	R	V	L	R	X	T	E	G	E	Q	L	E	L	F	D	G	S	N	H	I	Y	P	A	K	I	I	V	K	V	E	I	L	G	R	E	L	A	D	K	E	S	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			T	T		S													T	T	T	S				T	T								S	S	S																								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	I	H	L	G	Q	V	I	S	R	R	X	E	F	T	I	Q	K	S	V	E	L	G	V	N	V	I	T	P	L	W	S	E	R	C	G	V	K	L	D	A	E	R	X	D	K	K	I	Q	Q	W	Q	K	I	A	I	A	A	C	E	Q	C	G	R	N	I	V	P	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T										T	T	S						T	T	T	T																			T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	P	L	X	K	L	Q	D	W	C	A	E	N	D	G	A	L	K	L	N	L	H	P	R	A	H	Y	S	I	K	T	L	P	T	I	P	A	G	G	V	R	L	L	I	G	S	E	G	G	L	S	A	Q	E	I	A	Q	T	E	Q	Q	G	F	T	E	I	L	L	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T			S	S								T	T		S	B		T	T	T		S				T	T									T	T													T	T								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	R	V	L	R	T	E	T	A	S	L	A	A	I	S	A	L	Q	I	C	F	G	D	L	G	E	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																				S	S	T	T