PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1vhkA_

Fold library id	PDB Header	Molecule	Title
c1vhkA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: hypothetical protein yqeu;	PDBTitle: crystal structure of an hypothetical protein

Links to external resources
Added to library: Tue Mar 16 13:13:46 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q R Y F I E L T K Q Q I E E A P T F S I T G E E V H H I V N V X R X N E G D Q I I C C S Q D G F E A K C E L Q S V S K D K V S C L V I E W T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S S S T T T
T T
T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N E N R E L P I K V Y I A S G L P K G D K L E W I I Q K G T E L G A H A F I P F Q A A R S V V K R E R W T K I A K E A A E Q S Y R N E V P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T T T
T T
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V X D V H S F Q Q L L Q R X Q D F D K C V V A Y E S A F S A I V S S L P K G S S L L I V F G P E G G L T E A E V E R L T E Q D G V T C G L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
G G G S S
T
T T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . .

Sequence P R I L R T E T A P L Y A L S A I S Y Q T E L L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	R	Y	F	I	E	L	T	K	Q	Q	I	E	E	A	P	T	F	S	I	T	G	E	E	V	H	H	I	V	N	V	X	R	X	N	E	G	D	Q	I	I	C	C	S	Q	D	G	F	E	A	K	C	E	L	Q	S	V	S	K	D	K	V	S	C	L	V	I	E	W	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S							S	S	S	S					S								T	T	T				T	T								T	T	S												S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	E	N	R	E	L	P	I	K	V	Y	I	A	S	G	L	P	K	G	D	K	L	E	W	I	I	Q	K	G	T	E	L	G	A	H	A	F	I	P	F	Q	A	A	R	S	V	V	K	R	E	R	W	T	K	I	A	K	E	A	A	E	Q	S	Y	R	N	E	V	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S										S	T	T												T	T										T	T																			T	T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	X	D	V	H	S	F	Q	Q	L	L	Q	R	X	Q	D	F	D	K	C	V	V	A	Y	E	S	A	F	S	A	I	V	S	S	L	P	K	G	S	S	L	L	I	V	F	G	P	E	G	G	L	T	E	A	E	V	E	R	L	T	E	Q	D	G	V	T	C	G	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B									G	G	G	S	S																T			T	T										T	T													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Sequence	P	R	I	L	R	T	E	T	A	P	L	Y	A	L	S	A	I	S	Y	Q	T	E	L	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				T	T	T															T