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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2w2kB_

Fold library idPDB HeaderMoleculeTitle
c2w2kB_PDB header: oxidoreductaseChain: B: PDB Molecule: d-mandelate dehydrogenase;PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a.


Added to library: Sun Aug 29 05:38:15 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PRPRVLLLGDPARHLDDLWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNA
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Known secondary structure (DSSP)



SS

SS
S




TTTT


S
STTTTGGG

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence DLISHLPSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAART
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Known secondary structure (DSSP) TTS
TT

SSS

TTB
TT


TTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV
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Known secondary structure (DSSP)

TTT


STTS

STT


SS


T

 .........220.........230.........240.........250.........260.........270.........280
Sequence DSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLD
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Known secondary structure (DSSP) SS
S



SGGGTT
B
S
TT
S
GGGB
TTSS
 .........290.........300.........310.........320.........330.........340....
Sequence VHEFEPNVSKELIEMKHVTLTTHIGGVAIETFHEFERLTMTNIDRFLLQGKPLLTPAGKVFAPS
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Known secondary structure (DSSP) S
TTTTS

TSSS
SS
TT
ST



SSB
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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