PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3o7bA_

Fold library id	PDB Header	Molecule	Title
c3o7bA_	PDB header: transferase	Chain: A: PDB Molecule: ribosome biogenesis nep1 rna methyltransferase;	PDBTitle: crystal structure of archaeoglobus fulgidus nep1 bound to s-2 adenosylhomocysteine

Links to external resources
Added to library: Sat Jan 22 08:41:19 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M G S A F V F L E A S L E L I P Q K I R G H P A V R A D A I R R G K R P E K I L L D D S K H H T A M K S L E F R E K R G R P D I V H Q C L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
G G G T T S T S
G G G S B
G G G
T T
T T G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L L L D S P L R D F E V Y V H T L N G E I I W V N R E T R L P R N Y N R F V G L M E K L F E E R R I T A G D T T L I E F K D V G L R D I V R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S T T S
T T
S S S T T S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G R D V L L F R E K G G R F E F S E L L D G D V A V C I G A F P H G D F F E E T L R E L G E F K E V S L G T E S Y T S L Y V T S R V L C E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T S S S
S S S S
S
S S

. . . . . . .

Sequence E R V R A H Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	G	S	A	F	V	F	L	E	A	S	L	E	L	I	P	Q	K	I	R	G	H	P	A	V	R	A	D	A	I	R	R	G	K	R	P	E	K	I	L	L	D	D	S	K	H	H	T	A	M	K	S	L	E	F	R	E	K	R	G	R	P	D	I	V	H	Q	C	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			B			G	G	G	T	T	S											T	S		G	G	G	S	B							G	G	G		T	T		T	T	G	G	G		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	L	D	S	P	L	R	D	F	E	V	Y	V	H	T	L	N	G	E	I	I	W	V	N	R	E	T	R	L	P	R	N	Y	N	R	F	V	G	L	M	E	K	L	F	E	E	R	R	I	T	A	G	D	T	T	L	I	E	F	K	D	V	G	L	R	D	I	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		S			S								T	T	S							T	T					S	S															S					T	T								S	S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	R	D	V	L	L	F	R	E	K	G	G	R	F	E	F	S	E	L	L	D	G	D	V	A	V	C	I	G	A	F	P	H	G	D	F	F	E	E	T	L	R	E	L	G	E	F	K	E	V	S	L	G	T	E	S	Y	T	S	L	Y	V	T	S	R	V	L	C	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																		T	S	S	S								S	S	S	S												S								S	S
	.	.	.	.	.	.	.
Sequence	E	R	V	R	A	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)