Email l.a.kelley@imperial.ac.uk Description P0A8R0 Date Thu Jan 5 11:08:32 GMT 2012 Unique Job ID 02a4893a965230d2

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1q5xa_ 100.0 100 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 2 c3c8oB_ 100.0 55 PDB header:hydrolase regulator Chain: B: PDB Molecule:regulator of ribonuclease activity a; PDBTitle: the crystal structure of rraa from pao1 3 c2pcnA_ 100.0 38 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine:2-demethylmenaquinone PDBTitle: crystal structure of s-adenosylmethionine: 2-dimethylmenaquinone2 methyltransferase (gk_1813) from geobacillus kaustophilus hta426 4 d1vi4a_ 100.0 44 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 5 d1j3la_ 100.0 44 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 6 d1nxja_ 100.0 45 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 7 c1nxjA_ 100.0 45 PDB header:unknown function Chain: A: PDB Molecule:probable s-adenosylmethionine:2- PDBTitle: structure of rv3853 from mycobacterium tuberculosis 8 c3nojA_ 100.0 20 PDB header:lyase Chain: A: PDB Molecule:4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate PDBTitle: the structure of hmg/cha aldolase from the protocatechuate degradation2 pathway of pseudomonas putida 9 c3k4iC_ 100.0 19 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein pspto_3204 from2 pseudomonas syringae pv. tomato str. dc3000 10 c2c5qE_ 100.0 19 PDB header:structural genomics,unknown function Chain: E: PDB Molecule:rraa-like protein yer010c; PDBTitle: crystal structure of yeast yer010cp 11 d1vbga2 76.9 15 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:Pyruvate phosphate dikinase, central domain 12 d1kbla2 75.0 20 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:Pyruvate phosphate dikinase, central domain 13 d2gp4a1 60.6 20 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:IlvD/EDD C-terminal domain-like 14 d1f5va_ 55.4 18 Fold:FMN-dependent nitroreductase-like Superfamily:FMN-dependent nitroreductase-like Family:NADH oxidase/flavin reductase 15 d1e8ca2 55.2 20 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 16 c3n2sD_ 53.4 21 PDB header:oxidoreductase Chain: D: PDB Molecule:nadph-dependent nitro/flavin reductase; PDBTitle: structure of nfra1 nitroreductase from b. subtilis 17 d1zcha1 49.8 15 Fold:FMN-dependent nitroreductase-like Superfamily:FMN-dependent nitroreductase-like Family:NADH oxidase/flavin reductase 18 c2gp4A_ 47.1 18 PDB header:lyase Chain: A: PDB Molecule:6-phosphogluconate dehydratase; PDBTitle: structure of [fes]cluster-free apo form of 6-phosphogluconate2 dehydratase from shewanella oneidensis 19 c3eofB_ 43.7 13 PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase (yp_213212.1) from2 bacteroides fragilis nctc 9343 at 1.99 a resolution 20 d1bkja_ 42.7 18 Fold:FMN-dependent nitroreductase-like Superfamily:FMN-dependent nitroreductase-like Family:NADH oxidase/flavin reductase 21 c1vfgB_ not modelled 42.6 17 PDB header:transferase/rna Chain: B: PDB Molecule:poly a polymerase; PDBTitle: crystal structure of trna nucleotidyltransferase complexed2 with a primer trna and an incoming atp analog 22 c1ou5A_ not modelled 40.9 36 PDB header:translation, transferase Chain: A: PDB Molecule:trna cca-adding enzyme; PDBTitle: crystal structure of human cca-adding enzyme 23 d1vfga2 not modelled 37.7 17 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly A polymerase head domain-like 24 d1ou5a2 not modelled 33.3 36 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly A polymerase head domain-like 25 c1dbgA_ not modelled 33.1 19 PDB header:lyase Chain: A: PDB Molecule:chondroitinase b; PDBTitle: crystal structure of chondroitinase b 26 c2vpiA_ not modelled 31.2 16 PDB header:ligase Chain: A: PDB Molecule:gmp synthase; PDBTitle: human gmp synthetase - glutaminase domain 27 d1ofla_ not modelled 30.1 22 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Chondroitinase B 28 c1e8cB_ not modelled 27.4 20 PDB header:ligase Chain: B: PDB Molecule:udp-n-acetylmuramoylalanyl-d-glutamate--2,6- PDBTitle: structure of mure the udp-n-acetylmuramyl tripeptide2 synthetase from e. coli 29 d1miwa2 not modelled 24.8 23 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly A polymerase head domain-like 30 c3mvnA_ not modelled 23.7 14 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp 31 c3h37B_ not modelled 21.7 22 PDB header:transferase Chain: B: PDB Molecule:trna nucleotidyl transferase-related protein; PDBTitle: the structure of cca-adding enzyme apo form i 32 c3aqnA_ not modelled 19.5 18 PDB header:transferase Chain: A: PDB Molecule:poly(a) polymerase; PDBTitle: complex structure of bacterial protein (apo form ii) 33 d1thfd_ not modelled 18.7 12 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Histidine biosynthesis enzymes 34 c3l7oB_ not modelled 18.4 14 PDB header:isomerase Chain: B: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-phosphate isomerase a from streptococcus2 mutans ua159 35 c3k6hB_ not modelled 18.1 5 PDB header:oxidoreductase Chain: B: PDB Molecule:nitroreductase family protein; PDBTitle: crystal structure of a nitroreductase family protein from2 agrobacterium tumefaciens str. c58 36 c3tbiB_ not modelled 16.6 33 PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: crystal structure of t4 gp33 bound to e. coli rnap beta-flap domain 37 c2pjmA_ not modelled 16.4 19 PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: structure of ribose 5-phosphate isomerase a from2 methanocaldococcus jannaschii 38 c3bm2B_ not modelled 16.4 15 PDB header:oxidoreductase Chain: B: PDB Molecule:protein ydja; PDBTitle: crystal structure of a minimal nitroreductase ydja from escherichia2 coli k12 with and without fmn cofactor 39 c1fdvA_ not modelled 16.4 19 PDB header:dehydrogenase Chain: A: PDB Molecule:17-beta-hydroxysteroid dehydrogenase; PDBTitle: human 17-beta-hydroxysteroid-dehydrogenase type 1 mutant2 h221l complexed with nad+ 40 c2wzvB_ not modelled 15.3 8 PDB header:oxidoreductase Chain: B: PDB Molecule:nfnb protein; PDBTitle: crystal structure of the fmn-dependent nitroreductase nfnb2 from mycobacterium smegmatis 41 d1uj4a1 not modelled 14.3 15 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:D-ribose-5-phosphate isomerase (RpiA), catalytic domain 42 c1miyB_ not modelled 12.5 25 PDB header:translation, transferase Chain: B: PDB Molecule:trna cca-adding enzyme; PDBTitle: crystal structure of bacillus stearothermophilus cca-adding enzyme in2 complex with ctp 43 d1jtva_ not modelled 11.1 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 44 d1fcqa_ not modelled 10.3 16 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:Bee venom hyaluronidase 45 c3cioA_ not modelled 9.7 35 PDB header:signaling protein, transferase Chain: A: PDB Molecule:tyrosine-protein kinase etk; PDBTitle: the kinase domain of escherichia coli tyrosine kinase etk 46 c3bemA_ not modelled 9.6 16 PDB header:oxidoreductase Chain: A: PDB Molecule:putative nad(p)h nitroreductase ydfn; PDBTitle: crystal structure of putative nitroreductase ydfn (2632848) from2 bacillus subtilis at 1.65 a resolution 47 c2atmA_ not modelled 9.6 32 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronoglucosaminidase; PDBTitle: crystal structure of the recombinant allergen ves v 2 48 c1skoA_ not modelled 9.5 17 PDB header:signaling protein Chain: A: PDB Molecule:mitogen-activated protein kinase kinase 1 PDBTitle: mp1-p14 complex 49 c1fcuA_ not modelled 9.4 16 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronoglucosaminidase; PDBTitle: crystal structure (trigonal) of bee venom hyaluronidase 50 c3emkA_ not modelled 9.3 24 PDB header:oxidoreductase Chain: A: PDB Molecule:glucose/ribitol dehydrogenase; PDBTitle: 2.5a crystal structure of glucose/ribitol dehydrogenase2 from brucella melitensis 51 d1h6za2 not modelled 9.3 15 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:Pyruvate phosphate dikinase, central domain 52 c3mjjD_ not modelled 9.3 36 PDB header:hydrolase Chain: D: PDB Molecule:predicted acetamidase/formamidase; PDBTitle: crystal structure analysis of a recombinant predicted2 acetamidase/formamidase from the thermophile thermoanaerobacter3 tengcongensis 53 d1tvca1 not modelled 9.1 20 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like 54 d1ka9f_ not modelled 9.1 14 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Histidine biosynthesis enzymes 55 c1vdzA_ not modelled 8.4 12 PDB header:hydrolase Chain: A: PDB Molecule:a-type atpase subunit a; PDBTitle: crystal structure of a-type atpase catalytic subunit a from2 pyrococcus horikoshii ot3 56 c2pe4A_ not modelled 8.4 11 PDB header:hydrolase Chain: A: PDB Molecule:hyaluronidase-1; PDBTitle: structure of human hyaluronidase 1, a hyaluronan hydrolyzing enzyme2 involved in tumor growth and angiogenesis 57 d2f4la1 not modelled 8.4 21 Fold:CUB-like Superfamily:Acetamidase/Formamidase-like Family:Acetamidase/Formamidase-like 58 d1i1qb_ not modelled 8.4 19 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 59 c2xrfA_ not modelled 8.3 25 PDB header:transferase Chain: A: PDB Molecule:uridine phosphorylase 2; PDBTitle: crystal structure of human uridine phosphorylase 2 60 c3eo7A_ not modelled 8.3 24 PDB header:flavoprotein Chain: A: PDB Molecule:putative nitroreductase; PDBTitle: crystal structure of a putative nitroreductase (ava_2154) from2 anabaena variabilis atcc 29413 at 1.80 a resolution 61 c3pbiA_ not modelled 8.2 22 PDB header:hydrolase Chain: A: PDB Molecule:invasion protein; PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution 62 d1h5ya_ not modelled 8.2 16 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Histidine biosynthesis enzymes 63 c3hj9A_ not modelled 8.2 8 PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of a putative nitroreductase (reut_a1228) from2 ralstonia eutropha jmp134 at 2.00 a resolution 64 c3b9tD_ not modelled 7.8 29 PDB header:hydrolase Chain: D: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of predicted acetamidase/formamidase (yp_546212.1)2 from methylobacillus flagellatus kt at 1.58 a resolution 65 c2xivA_ not modelled 7.7 26 PDB header:structural protein Chain: A: PDB Molecule:hypothetical invasion protein; PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis 66 c2r01A_ not modelled 7.6 16 PDB header:oxidoreductase Chain: A: PDB Molecule:nitroreductase family protein; PDBTitle: crystal structure of a putative fmn-dependent nitroreductase (ct0345)2 from chlorobium tepidum tls at 1.15 a resolution 67 d2fsua1 not modelled 7.0 10 Fold:PLP-dependent transferase-like Superfamily:PhnH-like Family:PhnH-like 68 c2fsuA_ not modelled 7.0 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein phnh; PDBTitle: crystal structure of the phnh protein from escherichia coli 69 d1eara1 not modelled 7.0 30 Fold:Urease metallochaperone UreE, N-terminal domain Superfamily:Urease metallochaperone UreE, N-terminal domain Family:Urease metallochaperone UreE, N-terminal domain 70 d1j5ya1 not modelled 6.8 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Biotin repressor-like 71 c2i7hE_ not modelled 6.7 10 PDB header:oxidoreductase Chain: E: PDB Molecule:nitroreductase-like family protein; PDBTitle: crystal structure of the nitroreductase-like family protein from2 bacillus cereus 72 c2ii1A_ not modelled 6.6 29 PDB header:hydrolase Chain: A: PDB Molecule:acetamidase; PDBTitle: crystal structure of acetamidase (10172637) from bacillus halodurans2 at 1.95 a resolution 73 c3gt2A_ not modelled 6.6 17 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the p60 domain from m. avium2 paratuberculosis antigen map1272c 74 c3rkuC_ not modelled 6.5 18 PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase ymr226c; PDBTitle: substrate fingerprint and the structure of nadp+ dependent serine2 dehydrogenase from saccharomyces cerevisiae complexed with nadp+ 75 c1vbhA_ not modelled 6.5 16 PDB header:transferase Chain: A: PDB Molecule:pyruvate,orthophosphate dikinase; PDBTitle: pyruvate phosphate dikinase with bound mg-pep from maize 76 d2cs7a1 not modelled 6.3 21 Fold:IL8-like Superfamily:PhtA domain-like Family:PhtA domain-like 77 d1gph12 not modelled 6.1 16 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Class II glutamine amidotransferases 78 c1y43B_ not modelled 5.9 26 PDB header:hydrolase Chain: B: PDB Molecule:aspergillopepsin ii heavy chain; PDBTitle: crystal structure of aspergilloglutamic peptidase from2 aspergillus niger 79 c2kytA_ not modelled 5.7 9 PDB header:hydrolase Chain: A: PDB Molecule:group xvi phospholipase a2; PDBTitle: solution struture of the h-rev107 n-terminal domain 80 c3k81D_ not modelled 5.7 25 PDB header:immune system, rna binding protein Chain: D: PDB Molecule:mp18 rna editing complex protein; PDBTitle: structure of the central interaction protein from the trypanosoma2 brucei editosome in complex with single domain antibodies 81 d1vzwa1 not modelled 5.7 17 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:Histidine biosynthesis enzymes 82 d1p3da2 not modelled 5.5 27 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 83 c3ny0D_ not modelled 5.5 20 PDB header:metal binding protein Chain: D: PDB Molecule:urease accessory protein uree; PDBTitle: crystal structure of uree from helicobacter pylori (ni2+ bound form) 84 c2wknE_ not modelled 5.3 36 PDB header:hydrolase Chain: E: PDB Molecule:formamidase; PDBTitle: gamma lactamase from delftia acidovorans 85 d1vkya_ not modelled 5.2 18 Fold:QueA-like Superfamily:QueA-like Family:QueA-like