PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1bkja_

Fold library id	Fold	Superfamily	Family
d1bkja_	FMN-dependent nitroreductase-like	FMN-dependent nitroreductase-like	NADH oxidase/flavin reductase

Links to external resources
Added to library: Tue Mar 16 12:14:53 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N N T I E T I L A H R S I R K F T A V P I T D E Q R Q T I I Q A G L A A S S S S M L Q V V S I V R V T D S E K R N E L A Q F A G N Q A Y V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
B
S
T S
G G G
T T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S A A E F L V F C I D Y Q R H A T I N P D V Q A D F T E L T L I G A V D S G I M A Q N C L L A A E S M G L G G V Y I G G L R N S A A Q V D E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
S T T
G G G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L L G L P E N S A V L F G M C L G H P D Q N P E V K P R L P A H V V V H E N Q Y Q E L N L D D I Q S Y D Q T M Q A Y Y S T W S Q E V T G K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
B S
S S S

. . . . . . . . . 220 . . . . . . . . . 230

Sequence A G E S R P H I L P Y L N S K G L A K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	N	T	I	E	T	I	L	A	H	R	S	I	R	K	F	T	A	V	P	I	T	D	E	Q	R	Q	T	I	I	Q	A	G	L	A	A	S	S	S	S	M	L	Q	V	V	S	I	V	R	V	T	D	S	E	K	R	N	E	L	A	Q	F	A	G	N	Q	A	Y	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T							B		S																	T	S			G	G	G																						T	T	S		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	A	A	E	F	L	V	F	C	I	D	Y	Q	R	H	A	T	I	N	P	D	V	Q	A	D	F	T	E	L	T	L	I	G	A	V	D	S	G	I	M	A	Q	N	C	L	L	A	A	E	S	M	G	L	G	G	V	Y	I	G	G	L	R	N	S	A	A	Q	V	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S																	T	T					S																									T	T							G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	G	L	P	E	N	S	A	V	L	F	G	M	C	L	G	H	P	D	Q	N	P	E	V	K	P	R	L	P	A	H	V	V	V	H	E	N	Q	Y	Q	E	L	N	L	D	D	I	Q	S	Y	D	Q	T	M	Q	A	Y	Y	S	T	W	S	Q	E	V	T	G	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			T	T												B	S																	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Sequence	A	G	E	S	R	P	H	I	L	P	Y	L	N	S	K	G	L	A	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S				T	T								T	T		S