PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c2wzvB_

Fold library id	PDB Header	Molecule	Title
c2wzvB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: nfnb protein;	PDBTitle: crystal structure of the fmn-dependent nitroreductase nfnb2 from mycobacterium smegmatis

Links to external resources
Added to library: Sun Aug 29 00:33:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V D L A Q A A E R L I K G R R A V R A F R P D E V P E E T X R A V F E L A G H A P S N S N T Q P W H V E V V S G A A R D R L A E A L V T A H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
B
S
T T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A E E R V T V D F P Y R E G L F Q G V L Q E R R A D F G S R L Y A A L G I A R D Q T D L L Q G Y N T E S L R F Y G A P H V A X L F A P N N T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
S S
T T S S
T T
T T
T G G G
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E A R I A G D X G I Y A Q T L X L A X T A H G I A S C P Q A L L S F Y A D T V R A E L G V E N R K L L X G I S F G Y A D D T A A V N G V R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S G G G G B T
S
B
T T
G G G G

. . . . . . . . . 220 . . .

Sequence P R A G L S E T T R F S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	D	L	A	Q	A	A	E	R	L	I	K	G	R	R	A	V	R	A	F	R	P	D	E	V	P	E	E	T	X	R	A	V	F	E	L	A	G	H	A	P	S	N	S	N	T	Q	P	W	H	V	E	V	V	S	G	A	A	R	D	R	L	A	E	A	L	V	T	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																B				B		S																T	T				G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	E	E	R	V	T	V	D	F	P	Y	R	E	G	L	F	Q	G	V	L	Q	E	R	R	A	D	F	G	S	R	L	Y	A	A	L	G	I	A	R	D	Q	T	D	L	L	Q	G	Y	N	T	E	S	L	R	F	Y	G	A	P	H	V	A	X	L	F	A	P	N	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			B		S	S				T	T	S	S		T																		T			T	T														T	G	G	G		S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	A	R	I	A	G	D	X	G	I	Y	A	Q	T	L	X	L	A	X	T	A	H	G	I	A	S	C	P	Q	A	L	L	S	F	Y	A	D	T	V	R	A	E	L	G	V	E	N	R	K	L	L	X	G	I	S	F	G	Y	A	D	D	T	A	A	V	N	G	V	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T							S	G	G	G	G	B									T			S												B		T	T		G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	P	R	A	G	L	S	E	T	T	R	F	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)