Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3aqnA_

Fold library idPDB HeaderMoleculeTitle
c3aqnA_PDB header: transferaseChain: A: PDB Molecule: poly(a) polymerase;PDBTitle: complex structure of bacterial protein (apo form ii)


Added to library: Sat Feb 12 15:32:57 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFR
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)



TTTS



GGGS
S
TT

TSS

S

SS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NCRLVGRRFRLAHVMFGPEIIEVATFRGNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDG
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TS



SS

SS








TTSSSBSGGG
TTT


SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPAHLFEESLKLLQAGYGY
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
BSS

TTSS

TGGGGGGS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT

TT

TTS

TT



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence QKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S


S


TTS


TT
TT
 .........360.........370.........380........
Sequence YDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGML
Predicted secondary structure













SS confidence





































Known secondary structure (DSSP) TT
TTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D