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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1e8cB_

Fold library idPDB HeaderMoleculeTitle
c1e8cB_PDB header: ligaseChain: B: PDB Molecule: udp-n-acetylmuramoylalanyl-d-glutamate--2,6-PDBTitle: structure of mure the udp-n-acetylmuramyl tripeptide2 synthetase from e. coli


Added to library: Tue Mar 16 14:37:25 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRNLRDLLAPWVPDAPSRALREXTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEAT
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Known secondary structure (DSSP)

BTTT
TT



B


S
GGG

TT

B
SS
BGGGGTT
S
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence DGEIREXHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVXG
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Known secondary structure (DSSP) TT
TTTTTT
GGGSSSSS
TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAXEVSSHGLVQHRVAALKFAASVFTNLSRDHL
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Known secondary structure (DSSP) TT
BTT

B

S
SS

TT



TTTTTT
B
S



S

 .........220.........230.........240.........250.........260.........270.........280
Sequence DYHGDXEHYEAAWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSXEDHINPNCHGRWLKATEVNYHD
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Known secondary structure (DSSP)
S

SSB

TTSTT
TT
SSS


TTT
S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SGATIRFSSSWGDGEIESHLXGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRXEVFTAPGKPT
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Known secondary structure (DSSP) S
TT


S
STT

GGG



TTSS

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLXGAIAEEFADVAVVTDDNPRTEEPRA
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Known secondary structure (DSSP)


ST
SS



SSS
ST
S

S

BTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IINDILAGXLDAGHAKVXEGRAEAVTCAVXQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGV
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Known secondary structure (DSSP) TTSS
TTSS
S
S
TT
S
TT

TT

TS
 ......
Sequence IARSHH
Predicted secondary structure

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Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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