PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3n2sD_

Fold library id	PDB Header	Molecule	Title
c3n2sD_	PDB header: oxidoreductase	Chain: D: PDB Molecule: nadph-dependent nitro/flavin reductase;	PDBTitle: structure of nfra1 nitroreductase from b. subtilis

Links to external resources
Added to library: Sat Sep 18 08:59:16 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N T I E T I L N H R S I R S F T D Q L L T A E E I D T L V K S A Q A A S T S S Y V Q A Y S I I G V S D P E K K R E L S V L A G N Q P Y V E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
B
S
T S
G G G
T T S
G G G T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N G H F F V F C A D L Y R H Q Q L A E E K G E H I S E L L E N T E X F X V S L I D A A L A A Q N X S I A A E S X G L G I C Y I G G I R N E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T
T T G G G S T T
G G G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D K V T E V L Q T P D H V L P L F G L A V G H P A N L S G K K P R L P K Q A V Y H E N T Y N V N T D D F R H T X N T Y D K T I S D Y Y R E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
B S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence T N G K R E E T W S D Q I L N F X K Q K P R T Y L N D Y V K E K G F N K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
T T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	T	I	E	T	I	L	N	H	R	S	I	R	S	F	T	D	Q	L	L	T	A	E	E	I	D	T	L	V	K	S	A	Q	A	A	S	T	S	S	Y	V	Q	A	Y	S	I	I	G	V	S	D	P	E	K	K	R	E	L	S	V	L	A	G	N	Q	P	Y	V	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T							B		S																	T	S			G	G	G																						T	T	S		G	G	G	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	H	F	F	V	F	C	A	D	L	Y	R	H	Q	Q	L	A	E	E	K	G	E	H	I	S	E	L	L	E	N	T	E	X	F	X	V	S	L	I	D	A	A	L	A	A	Q	N	X	S	I	A	A	E	S	X	G	L	G	I	C	Y	I	G	G	I	R	N	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																				T				T	T	G	G	G	S																									T	T							G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	K	V	T	E	V	L	Q	T	P	D	H	V	L	P	L	F	G	L	A	V	G	H	P	A	N	L	S	G	K	K	P	R	L	P	K	Q	A	V	Y	H	E	N	T	Y	N	V	N	T	D	D	F	R	H	T	X	N	T	Y	D	K	T	I	S	D	Y	Y	R	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T			T	T												B	S																	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	T	N	G	K	R	E	E	T	W	S	D	Q	I	L	N	F	X	K	Q	K	P	R	T	Y	L	N	D	Y	V	K	E	K	G	F	N	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																S				T	T								T	T	S