Fold library entry viewer: c1vbhA_

Added to library: Tue Mar 16 14:04:02 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	R	V	F	H	F	G	K	G	K	S	E	G	N	K	T	M	K	E	L	L	G	G	K	G	A	N	L	A	E	M	A	S	I	G	L	S	V	P	P	G	F	T	V	S	T	E	A	C	Q	Q	Y	Q	D	A	G	C	A	L	P	A	G	L	W	A	E	I	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						T	T			S	S		T	T		T	T	T	S													T	T																				S	S	S	S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	L	Q	W	V	E	E	Y	M	G	A	T	L	G	D	P	Q	R	P	L	L	L	S	V	R	S	G	A	A	V	S	M	P	G	M	M	D	T	V	L	N	L	G	L	N	D	E	V	A	A	G	L	A	A	K	S	G	E	R	F	A	Y	D	S	F	R	R	F	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T		B	T	T		S	S	S	B										S	S			T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	F	G	N	V	V	M	D	I	P	R	S	L	F	E	E	K	L	E	H	M	K	E	S	K	G	L	K	N	D	T	D	L	T	A	S	D	L	K	E	L	V	G	Q	Y	K	E	V	Y	L	S	A	K	G	E	P	F	P	S	D	P	K	K	Q	L	E	L	A	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S																			S		S	S	T	T																							S	S					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	V	F	N	S	W	E	S	P	R	A	K	K	Y	R	S	I	N	Q	I	T	G	L	R	G	T	A	V	N	V	Q	C	M	V	F	G	N	M	G	N	T	S	G	T	G	V	L	F	T	R	N	P	N	T	G	E	K	K	L	Y	G	E	F	L	V	N	A	R	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T											T	T			S														S		S	S	T	T								S	S		T	T	T			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	D	L	D	A	M	K	N	L	M	P	Q	A	Y	D	E	L	V	E	N	C	N	I	L	E	S	H	Y	K	E	M	Q	D	I	E	F	T	V	Q	E	N	R	L	W	M	L	Q	C	R	T	G	K	R	T	G	K	S	A	V	K	I	A	V	D	M	V	N	E	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T					T	T																					S										T	T																											T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	E	P	R	S	A	I	K	M	V	E	P	G	H	L	D	Q	L	L	H	P	Q	F	E	N	P	S	A	Y	K	D	Q	V	I	A	T	G	L	P	A	S	P	G	A	A	V	G	Q	V	V	F	T	A	E	D	A	E	A	W	H	S	Q	G	K	A	A	I	L	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						G	G	G	S								T	T	S			B	S		T	T	T	T	G	G	G																				S										T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	E	T	S	P	E	D	V	G	G	M	H	A	A	V	G	I	L	T	E	M	T	S	H	A	A	V	V	A	R	G	W	G	K	C	C	V	S	G	C	S	G	I	R	V	N	D	A	E	K	L	V	T	I	G	G	H	V	L	R	E	G	E	W	L	S	L	N	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			T	T	T							S	S								S										T									S					T	T	T	T					T	T					T	T							T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	G	E	V	I	L	G	K	Q	P	L	S	P	P	A	L	S	G	D	L	G	T	F	M	A	W	V	D	D	V	R	K	L	K	V	L	A	N	A	D	T	P	D	D	A	L	T	A	R	N	N	G	A	Q	G	I	G	L	C	R	T	E	H	M	F	F	A	S	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					B	S				B						S																S								S										T	T			S						G	G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	I	K	A	V	R	Q	M	I	M	A	P	T	L	E	L	R	Q	Q	A	L	D	R	L	L	P	Y	Q	R	S	D	F	E	G	I	F	R	A	M	D	G	L	P	V	T	I	R	L	L	D	P	P	L	H	E	F	L	P	E	G	N	I	E	D	I	V	S	E	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S																										T	T	T	S									S		G	G	G	G	S			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	E	T	G	A	N	Q	E	D	A	L	A	R	I	E	K	L	S	E	V	N	P	M	L	G	F	R	G	C	R	L	G	I	S	Y	P	E	L	T	E	M	Q	A	R	A	I	F	E	A	A	I	A	M	T	N	Q	G	V	Q	V	F	P	E	I	M	V	P	L	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S		G	G	G	S	S		T																											T	T	T											S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	P	Q	E	L	G	H	Q	V	T	L	I	R	Q	V	A	E	K	V	F	A	N	V	G	K	T	I	G	Y	K	V	G	T	M	I	E	I	P	R	A	A	L	V	A	D	E	I	A	E	Q	A	E	F	F	S	F	G	T	N	D	L	T	Q	M	T	F	G	Y	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																						T	T													S						T					T	T	T		S															T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	D	V	G	K	F	I	P	V	Y	L	A	Q	G	I	L	Q	H	D	P	F	E	V	L	D	Q	R	G	V	G	E	L	V	K	F	A	T	E	R	G	R	K	A	R	P	N	L	K	V	G	I	C	G	E	H	G	G	E	P	S	S	V	A	F	F	A	K	A	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T							T	T	S		S	S		T	T	T	S			T	T	T																S	T	T							S	G	G	G	G												T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
Sequence	D	Y	V	S	C	S	P	F	R	V	P	I	A	R	L	A	A	A	Q	V	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						G	G	G											T	T

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PDB structure

FASTA sequence

Hidden Markov model

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