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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2021 Jan 16

Fold library idPDB HeaderMoleculeTitle
c6z5r0_ 2.80 photosynthesis Chain: 0: light-harvesting complex 1 beta chain;
c6lnhC_ 2.34 oxidoreductase Chain: C: l-isoleucine-4-hydroxylase;
c6tqdE_ 1.48 cell adhesion Chain: E: intimin;
c6wvdA_ 2.25 membrane protein Chain: A: green fluorescent protein, protein jagunal homolog 1
c7l6sA_ 1.95 isomerase Chain: A: dna topoisomerase ii;
c6vinA_ 3.04 hydrolase Chain: A: threonine aspartase 1;
c6zsoA_ UNK neuropeptide Chain: A: ly6/plaur domain-containing protein 6b;
c6x34H_ 4.70 transport protein/isomerase Chain: H: ryanodine receptor;
c6m2eB_ 2.60 biosynthetic protein Chain: B: sirohydrochlorin cobaltochelatase;
c6s3hA_ 2.06 hydrolase Chain: A: pif1 helicase;
c6wveA_ 2.43 membrane protein Chain: A: green fluorescent protein,chicken signal peptidase complex
c7cz3F_ 2.90 hydrolase Chain: F: acyl-coa hydrolase;
c6lptB_ 2.62 oxidoreductase Chain: B: d-2-hydroxyglutarate dehydrogenase, mitochondrial;
c6xmfA_ 3.10 hydrolase/rna Chain: A: crispr-cas;
c6x34B_ 4.70 transport protein/isomerase Chain: B: ryanodine receptor;
c6zb8A_ 1.35 hydrolase Chain: A: exo-beta-1,3-glucanase variant e167q/e295q;
c6wvfA_ 2.90 membrane protein Chain: A: green fluorescent protein,disulfide bond formation protein
c7amlC_ 3.50 signaling protein Chain: C: glial cell line-derived neurotrophic factor;
c6lpvA_ 2.30 plant protein Chain: A: spermidine hydroxycinnamoyl transferase;
c7jgeA_ 4.00 sugar binding protein Chain: A: erythrocyte membrane protein 1;
c6tplA_ 1.80 cell adhesion Chain: A: intimin;
c7cpxA_ 2.91 biosynthetic protein Chain: A: lovastatin nonaketide synthase, polyketide synthase
c7b2rB_ 1.60 ligase Chain: B: tripartite motif-containing protein 2;
c7k2tA_ 3.60 transport protein Chain: A: abc transporter;
c6x34D_ 4.70 transport protein/isomerase Chain: D: ryanodine receptor;
c6z5sW_ 2.65 photosynthesis Chain: W: light harvesting complex 1 protein w;
c7b3jA_ UNK protein binding Chain: A: isoform l-app677 of amyloid-beta precursor protein;
c6zdyA_ 1.45 metal binding protein Chain: A: protein s100-a9;
c7amlA_ 3.50 signaling protein Chain: A: proto-oncogene tyrosine-protein kinase receptor ret;
c7btgA_ 2.19 signaling protein Chain: A: geo10716p1;
c7cnaE_ 1.60 protein binding Chain: E: spindlin interactor and repressor of chromatin-binding
c6x34F_ 4.70 transport protein/isomerase Chain: F: ryanodine receptor;
c7kiyB_ 2.92 membrane protein Chain: B: high molecular weight rhoptry protein-2;
c6z5rH_ 2.80 photosynthesis Chain: H: h subunit of photosynthetic reaction center complex;
c7kiyA_ 2.92 membrane protein Chain: A: cytoadherence linked asexual protein 3;
c7d6bA_ 2.10 hydrolase Chain: A: beta-glucosidase 18;
c7amlE_ 3.50 signaling protein Chain: E: gdnf family receptor alpha;
c7jggA_ 4.88 sugar binding protein Chain: A: erythrocyte membrane protein 1;
c6ttbB_ 2.70 oxidoreductase Chain: B: formate dehydrogenase;
c6z0wA_ 2.10 protein transport Chain: A: flagellar biosynthetic protein flhb;
c6ttrB_ 2.85 signaling protein Chain: B: ggdef diguanylate cyclase dgcb;
c6xuxA_ 1.90 structural protein Chain: A: nanobody,glucosidase ygjk,glucosidase ygjk,nanobody;
c6lp4A_ 2.05 cell adhesion Chain: A: vesicle-associated membrane protein-associated protein
c7cuyA_ 2.08 hydrolase Chain: A: low molecular weight phosphotyrosine protein phosphatase 1;
c7kisA_ 2.87 hydrolase/inhibitor/antibiotic Chain: A: peptidoglycan d,d-transpeptidase mrda;
c7db7B_ 2.71 ligase Chain: B: phenylalanine--trna ligase beta subunit;
c6tntG_ 3.78 cell cycle Chain: G: anaphase-promoting complex subunit cdc26;
c6lphB_ 1.91 protein binding Chain: B: serine/threonine-protein kinase fused;
c7b7oA_ UNK membrane protein Chain: A: sec-independent protein translocase protein tata,
c7b2sA_ 1.50 ligase Chain: A: e3 ubiquitin-protein ligase trim9;
c6tntW_ 3.78 cell cycle Chain: W: anaphase-promoting complex subunit cdc26;
c6lpwB_ 2.40 plant protein Chain: B: spermidine sinapoyl-coa acyltransferase;
c7kiyC_ 2.92 membrane protein Chain: C: high molecular weight rhoptry protein 3;
c7cnaB_ 1.60 protein binding Chain: B: spindlin interactor and repressor of chromatin-binding
c7kwsA_ 2.09 oxidoreductase Chain: A: udp-glucose 6-dehydrogenase;
c6y4jA_ 1.38 oxidoreductase Chain: A: fructosyl peptide oxidase;
c7b0yb_ 3.60 splicing Chain: B: dna-directed rna polymerase subunit beta;
c7db8A_ 2.30 ligase Chain: A: phenylalanine--trna ligase alpha subunit;
c7kchA_ 4.33 contractile protein Chain: A: unconventional myosin heavy chain;
c6ve5B_ 2.00 protein binding Chain: B: shieldin complex subunit 3;
c6zssA_ UNK neuropeptide Chain: A: ly6/plaur domain-containing protein 1;


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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