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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6xuxA_

Fold library idPDB HeaderMoleculeTitle
c6xuxA_1.90PDB header: structural proteinChain: A: PDB Molecule: nanobody,glucosidase ygjk,glucosidase ygjk,nanobody;


Added to library: Sat Jan 16 10:52:42 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQLVESGGGLVKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGG
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Known secondary structure (DSSP)





T
GGG
T
TT
GGGT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYIN
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Known secondary structure (DSSP)
GGGG



TT

S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFV
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Known secondary structure (DSSP) TTTTT



SS

TTS
SS
B
GGG


GGGGT
S
T
TTTT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPL
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Known secondary structure (DSSP)
S
SS
TT
TT

TT
TTTT
TT
STTTTSSS


S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TGAQQGAPNFSWSAAHLYMLYNDFFRKQNADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHL
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Known secondary structure (DSSP) T

S
SS
T




GGGSTTSS

B




TTS
BSS

B

TT
SB
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLR
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Known secondary structure (DSSP) B

STTTTTS


TTTT


TT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVR
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Known secondary structure (DSSP) TTSS


TTSSS
B
TT


TT



 .........500.........510.........520.........530.........540.........550.........560
Sequence ATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPA
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Known secondary structure (DSSP) TTT

S

SS

TTSS

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence FYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWP
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Known secondary structure (DSSP)


TT



BTTB
S

S
TT
TTT
TT
B
 .........640.........650.........660.........670.........680.........690.........700
Sequence WDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKP
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Known secondary structure (DSSP) TTT
TT


TT
SS
GGGTT


SBB
SS

GGGTS

SS
B
S



 .........710.........720.........730.........740.........750.........760.........770
Sequence SLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKS
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Known secondary structure (DSSP)



S
TT
SS





TTTB
TT

B

 .........780.........790.........800.........810.........820.........830.........840
Sequence LRLSCAASGRTFSTAAMGWFRQAPGKERDFVAGIYWTVGSTYYADSAKGRFTISRDNAKNTVYLQMDSLK
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Known secondary structure (DSSP) SS

TTS
TTS

TTTT
GGGTTTTTTT
S

 .........850.........860.........870.........
Sequence PEDTAVYYCAARRRGFTLAPTRANEYDYWGQGTQVTVSS
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Known secondary structure (DSSP) GGG

S

SS


SGGG








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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