Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6wvdA_

Fold library idPDB HeaderMoleculeTitle
c6wvdA_2.25PDB header: membrane proteinChain: A: PDB Molecule: green fluorescent protein, protein jagunal homolog 1


Added to library: Sat Jan 16 08:33:45 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTGKLPVPWPTLVTTLVQCFSR
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

TTGGGGSSTTTTTTTTSS
SS
GGGGTTT

GGG
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence YPDHMKRHDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEY
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

GGGGGG
TTTT
TTS
TTS

TTSTTTTT
B
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NMASRQHRERVAMHYQMSVTLKYEIKKLIYVHLVIWLLLVAKMSVGHLRLLSHDQVAMPYQWEYPYLLSI
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) S




TTSS
TTTB



TTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPSLLGLLSFPRNNISYLVLSMISMGLFSIAPLIYGSMEMFPAAQQLYRHGKAYRFLFGFSAVSIMYLVL
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) TTTT
TTT


S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VLAVQVHAWQLYYSKKLLDSWFTSTQEKKHKNSHNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQ
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TGGGTTTT
 .........360.........370.........380.........390.......
Sequence NTPIGDGPVLLPDNHYLSTQSVLSKDPNEKRDHMVLLEFVTAAGITH
Predicted secondary structure






























SS confidence














































Known secondary structure (DSSP) SSSS





S

TT

SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D