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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7jgeA_

Fold library idPDB HeaderMoleculeTitle
c7jgeA_4.00PDB header: sugar binding proteinChain: A: PDB Molecule: erythrocyte membrane protein 1;


Added to library: Sat Jan 16 09:31:01 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKADPSEVEYYRSGGDGDYLKNNICKITVNHSDSGCEKKLPICVPPRRERLCTYNFDKIRDNNAFLADVL
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Known secondary structure (DSSP)





S


SSSSS
STTSSSS




STTSS











GGGGG









S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTARNEGEKIVQNHPDTNSSNVCNALERSFADLADIIRGTDQWKGTNSNLEKNLKQMFAKIRENDKVLYT
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Known secondary structure (DSSP)
S
TTSSSSSSSS




SS
TTS




 .........150.........160.........170.........180.........190.........200.........210
Sequence KLREAWWNANRQKVWEVITCGARSNDLLELCRKCGHYEKEVPTKLDYVPQFLRWLTEWIEDFYREKQNLI
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Known secondary structure (DSSP) GGGTGGGS

S






SSSS
SSSSS
S



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DDMERHREECTSYCSTCKDKCKKYCECVKKWKTEWENQENKYKDLYEQNKNTSRYDDYVKDFFEKLEATS
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Known secondary structure (DSSP)





S


 .........290.........300.........310.........320.........330.........340.........350
Sequence RSKKKWIWKKSSGNEEGLQEEYANTIGLPPRTQSLYLGNLPKLENVCEDGCLIVSFHEGKNLKKRYPQNK
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Known secondary structure (DSSP)







SB

TTS
SB
SSSTT
S


T
GGGSSSS

SSS



T
 .........360.........370.........380.........390.........400.........410.........420
Sequence NSGNKENLCKALEYSFADYGDLIKGTSIWDNEYTKDLELNLQNNFGKLFGSSLDELRESWWNTNKKYIWT
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Known secondary structure (DSSP) TS

SST





TTS


 .........430.........440.........450.........460.........470.........480.........490
Sequence AMKHGAEMNITTGSGSSCDDIPTIDLIPQYLRFLQEWVENFCEQRQAKVKDVITNCKSCCKTKCKDECEK
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Known secondary structure (DSSP) TTTT
SS





SS


S
S







S



STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence YKKFIEACGGIGTAGSPWSKRWDQIYKRYSKHIEDAKRNRKAGTKNCCVQSDIDSFFKHLIDIGLTTPSS
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Known secondary structure (DSSP) S




STTSS
S

S
SS



SS
T

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence YLSNVLDDNICGADKAPWTTYTTYTTTEKCDTLVVVNVPSPLGNTPYRYKYACQCKIPTNEETCDDRKEY
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Known secondary structure (DSSP)

TTTTTTTT

SSSS

S






TTTSSSSTT
TTTTT




TTT
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence MNQWSCKNDNYELCKYNGVDVKPTTVRSNSSKLDGNDVTFFNLFEQWNKEIQYQIEQYMTNANCKEKCKC
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Known secondary structure (DSSP)


B










BSSS




S



TTSS
SS



 .........710.........720.........730.........740.........750.........760.........770
Sequence YKLWIEKINDQWGKQKDNYNKFRSKQIYDKVVSLSNFLFFSCWEEYIQKYFNGDWSKIKNIGSDTFEFLI
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Known secondary structure (DSSP)




SSSS
S
TT


TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence KKCGNNSAHGEEIFNEKLKNAEKKCKENESTSCDLNATNYIRGCQSKTYDGKIFGEKQWICGACIPPRTQ
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Known secondary structure (DSSP) T

SS

TT







S


S





SS














 .........850.........860.........870.........880.........890.........900.........910
Sequence NLCVGELLLKEKIKNAIHKETELLYEYHDTGTAIISKNDKKGQKGKNDPNGLPKGFCHAVQRSFIDYKNM
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Known secondary structure (DSSP) S
S






TTTS


SS
SSS


TTSS
TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence ILGTSVNIYEHIGKLQEDIKKIINAWWKGIEREMWDAVRCAITKINKKNNNSIFNGDECGVSPPTGNDED
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Known secondary structure (DSSP) T
S






SS

SS
SS
SS



SS
T
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QSVSWFKEWGEQFCIERLRYEQNIREACTIDKIQGACKRKCEKYKKYISEKKQEWDKQKTKYENKYVGKS
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Known secondary structure (DSSP) TS





SS
SSS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ASDLLKENYPECISANFDFIFNDNIEYKTYYPYGDYSSICSCEQVKYYKYNNAEKKNNKSLCYEKDNDMT
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Known secondary structure (DSSP) S
TT
SS

T

SSGGGTT
TTSS
S







TTS
S











SS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence WSKKYIKEGVYVPPRRQQLCLYELFPIIIKNEEGMEKAKEELLETLQIVAEREAYYLWKQYNPTGKGIDD
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Known secondary structure (DSSP)
B
TTB




B
TGGGG


TT
SS
SGGG


 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence ANKKACCAIRGSFYDLEDIIKGNDLVHDEYTKYIDSKLNEIFGSSDTNDIDTKRARTDWWENETRKTIRQ
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Known secondary structure (DSSP) T


B

SS
SSS
S




 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LVWDAMQSGVRYAVEEKNENFPLCMGVEHIGIAKPQFIRWLEEWTNEFCEKYTKYFEDMKSKCIECKKAC
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Known secondary structure (DSSP) TTTT



TTS












 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence ANYTNWLNPKRIEWNGMSNYYNKIYRKSNKESEGGKDYSMIMAPTVIDYLNKRCHGEINGNYICCSCKNI
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Known secondary structure (DSSP) STT

TTTSSSS


TT


SSTTTSSS


SSS




S
T
 .........1410.........1420.........1430.......
Sequence GAYNTTSGTVNKKLQKKETECEEEKGPLDLMNEVLNK
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Known secondary structure (DSSP) TTTTTSSTTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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