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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6lpwB_

Fold library idPDB HeaderMoleculeTitle
c6lpwB_2.40PDB header: plant proteinChain: B: PDB Molecule: spermidine sinapoyl-coa acyltransferase;


Added to library: Sat Jan 16 08:45:10 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPLMVEKMLTEMVKPSKHIPQQTLNLSTLDNDPYNEVIYKACYVFKAKNNRPEALLREALSDLLGYYYPL
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Known secondary structure (DSSP)





SS






GGG







TTTSGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGSLKRQESDRKLQLSCGGDGGGVPFTVATANVELSSLKNLENIDSDTALNFLPVLHVDIDGYRPFALQV
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Known secondary structure (DSSP) GS
SSSS
SSTT

SS
GGGGGGGTT

GGGS



TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TKFECGGFILGMAMSHAMCDGYGEGHIMCALTDLAGGKKKPMVTPIWERERLVGKPEDDQPPFVPGDDTA
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Known secondary structure (DSSP)
TTS
TTT

TT
SS
SS

B

GGGG




TT




TTSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ASPYLPTDDWVTEKITIRADSIRRLKEATLKEYDFSNETITTFEVIGAYLWKSRVKALNLDRDGVTVLGL
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Known secondary structure (DSSP)

TT
S
S

TTS

TT



T

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SVGIRNVVDPPLPDGYYGNAYIDMYVPLTAREVEEFTISDIVKLIKEAKRNAHDKDYLQEELANTEKIIK
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Known secondary structure (DSSP)
TTTSSS


TTB
S

S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence MNLTIKGKKDGLFCLTDWRNIGIFGSMDFGWDEPVNIVPVVPSETARTVNMFMRPSRLESDMVGGVQIVV
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Known secondary structure (DSSP) T



S

TT
TTTT
SS


SSS
S
S

TTTGGG


TT
GGGTT
 .........430......
Sequence TLPRIAMVKFKEEMEA
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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