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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6lpvA_

Fold library idPDB HeaderMoleculeTitle
c6lpvA_2.30PDB header: plant proteinChain: A: PDB Molecule: spermidine hydroxycinnamoyl transferase;


Added to library: Sat Jan 16 08:46:57 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PITFRKSYTIVPAEPTWSGRFPLAEWDQVGTITHIPTLYFYDKPSESFQGNVVEILKTSLSRVLVHFYPM
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Known secondary structure (DSSP)


SS





GGGGSB

S



TT

S
TGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGRLRWLPRGRFELNCNAEGVEFIEAESEGKLSDFKDFSPTPEFENLMPQVNYKNPIETIPLFLAQVTKF
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Known secondary structure (DSSP) GS
STT




SS
GGG
S

SS
TT
TTTS



TTS
GGGS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KCGGISLSVNVSHAIVDGQSALHLISEWGRLARGEPLETVPFLDRKILWAGEPLPPFVSPPKFDHKEFDQ
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Known secondary structure (DSSP) TTS
TTT

TT


SS

B

GGGGTTTS




SS





GGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PPFLIGETDNVEERKKKTIVVMLPLSTSQLQKLRSKANGSKHSDPAKGFTRYETVTGHVWRCACKARGHS
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Known secondary structure (DSSP)



SS
SSSS

STTS
SSS


T

 .........290.........300.........310.........320.........330.........340.........350
Sequence PEQPTALGICIDTRSRMEPPLPRGYFGNATLDVVAASTSGELISNELGFAASLISKAIKNVTNEYVMIGI
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Known secondary structure (DSSP) TT

TTTSSS


TTB
S

S
T

 .........360.........370.........380.........390.........400.........410.........420
Sequence EYLKNQKDLKKFQDLYGNPNLGVVSWLTLPMYGLDFGWGKEFYTGPGGDSLILPDQNEDGSVILATCLQV
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Known secondary structure (DSSP)
S
GGGGB



TT

TT


S


SSS


S


TTSTT
 .........430....
Sequence AHMEAFKKHFYEDI
Predicted secondary structure


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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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