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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7cpxA_

Fold library idPDB HeaderMoleculeTitle
c7cpxA_2.91PDB header: biosynthetic proteinChain: A: PDB Molecule: lovastatin nonaketide synthase, polyketide synthase


Added to library: Sat Jan 16 12:02:28 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQSMYPNEPIVVVGSGCRFPGDANTPSKLWELLQHPRDVQSRIPKERFDVDTFYHPDGKHHGRTNAPYAY
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Known secondary structure (DSSP)
TT
SSS

BTTTB
SS






TTT

GGGTB
SSTTSTT
BS

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLQDDLGAFDAAFFNIQAGEAESMDPQHRLLLETVYEAVTNAGMRIQDLQGTSTAVYVGVMTHDYETVST
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Known secondary structure (DSSP)

SS
TTB

TTTTT

S
T

TTS





TTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RDLESIPTYSATGVAVSVASNRISYFFDWHGPSMTIDTACSSSLVAVHLAVQQLRTGQSSMAIAAGANLI
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Known secondary structure (DSSP) SSSTT

TT
TTT

S


GGGTTS
S


 .........220.........230.........240.........250.........260.........270.........280
Sequence LGPMTFVLESKLSMLSPSGRSRMWDAGADGYARGEAVCSVVLKTLSQALRDGDTIECVIRETGVNQDGRT
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Known secondary structure (DSSP)
STT
B
TTSS

TTBTT


B
BB
TT


S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TGITMPNHSAQEALIKATYAQAGLDITKAEDRCQFFEAHGTGTPAGDPQEAEAIATAFFGHERAPLFVGS
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Known secondary structure (DSSP) SSSS


TT

TT
TTTS
S





TTSS






 .........360.........370.........380.........390.........400.........410.........420
Sequence AKTVVGHTEGTAGLAGLMKASFAVRHGVIPPNLLFDKISPRVAPFYKNLRIPTEATQWPALPPGQPRRAS
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Known secondary structure (DSSP) GGGTT
B
T


SS
SSB
TTTGGG
TT

SS





TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence VNSFGFGGTNAHAIIEEYMEPLSLPLVLSAKSQRSLKIMMEEMLQFLQSHPEIHLHDLTWSLLRKRSVLP
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Known secondary structure (DSSP) TTT








SS
TTS
SS


S
 .........500.........510.........520.........530.........540.........550.........560
Sequence FRRAIVGHSHETIRRALEDAIEDGIVSSDGQPSVLGIFTGQGAQWPGMLKNLIEASPYVRNIVRELDDSL
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Known secondary structure (DSSP)

SS








TT


TTTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence QSLPEKYRPSWTLLDQFMLEGEASNVQYATFSQPLCCAVQIVLVRLLEAARIRFTAVVGHSSGEIACAFA
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Known secondary structure (DSSP) TS
TTT




GGGTTS
TTT





TT


ST
 .........640.........650.........660.........670.........680.........690.........700
Sequence AGLISASLAIRIAYLRGVASNSPDSVTFSGDAYHSHHMLPCADPYMQALEECGSVPWYSSVDAENRQMAA
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Known secondary structure (DSSP) TTSS




BTTB







SSGGG





SSSSSTT
STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence RDVTAKYWKDNLVSPVLFSHAVQRAVVTHKALDIGIEVGCHPALKSPCVATIKDVLSGVDLAYTGCLERG
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Known secondary structure (DSSP) TTSSTTSS


TTT

SSTTSSTTT


SS
SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence KNDLDSFSRALAYLWERFGASSFDADEFMRAVAPDRPCMSVSKLLPAYPWDRSRRYWVESRATRHHLRGP
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Known secondary structure (DSSP) S
TGGG

S

SS



GGGTS







SB




SSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence KPHLLLGKLSEYSTPLSFQWLNFVRPRDIEWLDGHALQGQTVFPAAGYIVMAMEAALMIAGTHAKQVKLL
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Known secondary structure (DSSP)

BTTTB
TT

SS
GGGSGGGGG
TT

TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence EILDMSIDKAVIFDDEDSLVELNLTADVSRNAGEAGSMTISFKIDSCLSKEGNLSLSAKGQLALTIEDVH
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Known secondary structure (DSSP)
S

SSTT

TTTTSSTTS




 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence HLPPPEEEHPHMNRVNINAFYHELGLMGYNYSKDFRRLHNMQRADLRASGTLDFIPLMDEGNGCPLLLHP
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Known secondary structure (DSSP)
S



S

S


TTB


GGGG


TT




TTTT
S

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ASLDVAFQTVIGAYSSPGDRRLRCLYVPTHVDRITLVPSLCLATAESGCEKVAFNTINTYDKGDYLSGDI
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Known secondary structure (DSSP)

TTT



S

S



SSSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence VVFDAEQTTLFQVENITFKPFSPPDASTDHAMFARWSWGPLTPDSLLDNPEYWATAQDKEAIPIIERIVY
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Known secondary structure (DSSP)
TT

SS


GGG




BSS

S

GGGS

TTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence FYIRSFLSQLTLEERQQAAFHLQKQIEWLEQVLASAKEGRHLWYDPGWENDTEAQIEHLCTANSYHPHVR
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Known secondary structure (DSSP) TSTTTTTTSTTSTTTTTTTSSSS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LVQRVGQHLLPTVRSNGNPFDLLDHDGLLTEFYTNTLSFGPALHYARELVAQIAHRYQSMDILEIGAGTG
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Known secondary structure (DSSP) TTTT
S
TTTTSTT
SS
TTTS
ST
TTS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence GATKYVLATPQLGFNSYTYTDISTGFFEQAREQFAPFEDRMVFEPLDIRRSPAEQGFEPHAYDLIIASNV
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Known secondary structure (DSSP) TSTT



SST
STTTTT



TTS
TGGGT

TT
S
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence LHATPDLEKTMAHARSLLKPGGQMVILEITHKEHTRLGFIFGLFADWWAGVDDGRCTEPFVSFDRWDAIL
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Known secondary structure (DSSP) GGG
TT


S

TT
TTTSTTGGGSSSSS



 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence KRVGFSGVDSRTTDRDANLFPTSVFSTHAIDATVEYYPPLVVVGGQTPQSQRLLNDIKAIMPPRPLQTYK
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Known secondary structure (DSSP) TTS





SSSS
TTT


SS









SS
S

S
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence RLVDLLDAEELPMKSTFVMLTELDEELFAGLTEETFEATKLLLTYASNTVWLTENAWVQHPHQASTIGML
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Known secondary structure (DSSP) ST
S


TT
TTTSS
GGGSGGGTSTTTT
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence RSIRREHPDLGVHVLDVDAVETVEQVLRLEEHTDELASSTTWTQEPEVSWCKGRPWIPRLKRDLARNNRM
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Known secondary structure (DSSP)
TTSS
TT





TTSS




TT

 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence NSSRRPIYEMIDSSRAPVALQTARDSSSYFLESAETWFVPESVQQMETKTIYVHFSCPHALRVQALGFFY
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Known secondary structure (DSSP) TTS

TTTS

TT
S









TTTTT
TTT
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence LVQGHVQEGNREVPVVALAERNASIVHVRPDYIYTEADNNLSEGGGSLMVTVLAAAVLAETVISVTDSIL
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Known secondary structure (DSSP) TTSS
BS
GGG



TTS
TT


S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence VLNPPSICGQMLLHAGEEIGLQVHLATTSSWLTLHARDTDWHLRRVLPRGVQALVDLSADQSCEGLTQRM
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Known secondary structure (DSSP) S

T






TT

S
TT



SSTT
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence MKVLMPGCAHYRAADLFTDTVSLPAAYWEHVVSLARQGLPSVSEGWEVMPCTQFAAHADKTRPDLSTVIS
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Known secondary structure (DSSP) S
TT

S




TTTGGGS
TTSS

SSS

TT
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence WPRESDEATLPTRVRSIDAETLFAADKTYLLVGLTGDLGRSLGRWMVQHGACHIVLTSRNPQVNPKWLAH
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Known secondary structure (DSSP)


S


TTSS

S
TTST

STT


SS



 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence VEELGGRVTVLSMDVTSQNSVEAGLAKLKDLHLPPVGGIAFGPLVLQDVMLNNMELPMMEMVLNPKVEGV
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Known secondary structure (DSSP) TT




TTSTT











TTT

 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence RILHEKFSDPTSSNPLDFFVMFSSIVAVMGNPGQANYSAANCYLQALAQQRVASGLAASTIDIGAVYGVG
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Known secondary structure (DSSP) T

TTSSS

ST

TT
TT



SSSS
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence FVTRAELEEDFNAIRFMFDSVEEHELHTLFAEAVVAGRRAVHQQEQQRKFATVLDMADLELTTGIPPLDP
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Known secondary structure (DSSP) TT
TTTTS

TT



SGGG
TTT




B
G
 .........2250.........2260..
Sequence ALKDRITFFDDPRIGNLKIPEY
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Known secondary structure (DSSP) GGTTT
TTTT
GGGGGGB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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