Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7kisA_

Fold library idPDB HeaderMoleculeTitle
c7kisA_2.87PDB header: hydrolase/inhibitor/antibioticChain: A: PDB Molecule: peptidoglycan d,d-transpeptidase mrda;


Added to library: Sat Jan 16 09:20:45 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HVQPIPPTRGIIFDRNGVIIADNRPSFSQFVRHYPLKEHFAHSVGYVGRINEQELKNLDPINYSGTHHIG
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)









TT






TTGGGGTTTT


SSGGGGS
TTTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence KTGIERFYESELHGTVGYERTDPIPGKDIVLSIDSRLQEAAENALAGRRGAIVAIQPSTGDVLAMVSQPS
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TB



B


B


S

TT
S
TTT
BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YDPNLFVTGISFKAYAELRDSIDRPLYNRVLRGLYPPGSTVKPAVALAGLDAGVVTPTSRVFDPGYYQLP
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)

GGGTSS


T
TT
TT



B

GGGGTSS
TT

SS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NYDHKYRNWNRYGDGWVSLESAIYRSNDTYFYDLAHKLGIDRLHAFMSRFGFGQKVALDMFGEADGLMPS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) S




SSTT


TT

TT
SS


SS
TT



B


 .........290.........300.........310.........320.........330.........340.........350
Sequence REWKRKTRRQVWYPGETLILGIGQGYMQATPIQLAQMTALLANKGHWIRPHLAKTIDGQPPVDPDPMPDI
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) T
S


TTT
TT
BB
TTT




BSTTB



SS




 .........360.........370.........380.........390.........400.........410.........420
Sequence VLRDPANWDRVDYGMQQVVHGARGTARKVGATSAYLIAGKSGTAQVRHRDHALFVGFAPANNPQIAVAVM
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

SSTSTT
TTTT
SS









STTS

 .........430.........440.........450........
Sequence VENGESGSGVAAPVVKQVMDAWLLDEHGKLKAEYAEPV
Predicted secondary structure



















SS confidence





































Known secondary structure (DSSP) TT


TTTTB
TTSSB
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D