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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2018 Aug 18

Fold library idPDB HeaderMoleculeTitle
c6czlA_ 2.92 transferase Chain: A: atp phosphoribosyltransferase catalytic subunit;
c6c4yI_ 2.50 de novo protein Chain: I: cross-alpha amyloid-like structure alphaamg;
c6czaB_ 1.71 oxidoreductase Chain: B: 4fe-4s ferredoxin, iron-sulfur binding domain protein;
c6guiA_ 1.70 hydrolase Chain: A: siderophore esterase iroe-like, putative;
c6cwhB_ 2.00 sugar binding protein Chain: B: surface (s-) layer glycoprotein;
c6bp6A_ 2.17 endocytosis Chain: A: comm domain-containing protein 9;
c6guoC_ 1.75 hydrolase Chain: C: putative siderophore-degrading esterase (eurofung);
c6ch0I_ 2.15 hydrolase Chain: I: beta-lactamase;
c6c4xH_ 3.55 de novo protein Chain: H: cross-alpha amyloid-like membrane peptide alpha-ammem;
c6bwdB_ 3.70 membrane protein Chain: B: transient receptor potential cation channel subfamily m
c6flyA_ 2.75 sugar binding protein Chain: A: jacalin-like lectin;
c6flsD_ 2.80 unknown function Chain: D: pentapeptide repeat family protein;
c6et8B_ 1.70 protein binding Chain: B: albicidin resistance protein;
c6c4zI_ 3.30 de novo protein Chain: I: cross-alpha amyloid-like structure alphaamg - low
c5y28B_ 3.09 hydrolase Chain: B: periplasmic serine endoprotease degp-like;
c6gupB_ 1.85 hydrolase Chain: B: siderophore biosynthesis lipase/esterase, putative;
c6c4yM_ 2.50 de novo protein Chain: M: cross-alpha amyloid-like structure alphaamg;
c6c51C_ 2.00 de novo protein Chain: C: cross-alpha amyloid-like structure alphaaml;
c6dhiD_ 3.10 plant protein, hydrolase Chain: D: asparaginyl endopeptidase;
c6c4zD_ 3.30 de novo protein Chain: D: cross-alpha amyloid-like structure alphaamg - low
c6c4xC_ 3.55 de novo protein Chain: C: cross-alpha amyloid-like membrane peptide alpha-ammem;
c6d1oD_ 2.70 oxidoreductase Chain: D: (r)-phenoxypropionate/alpha-ketoglutarate-dioxygenase;
c6ffjA_ 2.20 antitumor protein Chain: A: 14f7-derived scfv;
c6c4yB_ 2.50 de novo protein Chain: B: cross-alpha amyloid-like structure alphaamg;
c6c4yD_ 2.50 de novo protein Chain: D: cross-alpha amyloid-like structure alphaamg;
c6c13A_ 11.33 membrane protein Chain: A: protocadherin-15;
c6gu8A_ 2.02 hydrolase Chain: A: putative acetyl xylan esterase;
c6bwdD_ 3.70 membrane protein Chain: D: transient receptor potential cation channel subfamily m
c6f01B_ 2.50 transferase Chain: B: glutathione s-transferase f9;
c6c4yR_ 2.50 de novo protein Chain: R: cross-alpha amyloid-like structure alphaamg;
c6c52C_ 1.60 de novo protein Chain: C: cross-alpha amyloid-like structure alphatet;
c6cz7C_ 1.62 oxidoreductase Chain: C: arra;
c5mz9A_ 2.21 signaling protein Chain: A: mgp-operon protein 3;
c6a70B_ 3.60 membrane protein Chain: B: polycystin-1;
c6gpcB_ 1.75 transport protein Chain: B: amino acid abc transporter, periplasmic amino acid-binding
c6c4xB_ 3.55 de novo protein Chain: B: cross-alpha amyloid-like membrane peptide alpha-ammem;
c6c4yO_ 2.50 de novo protein Chain: O: cross-alpha amyloid-like structure alphaamg;
c6c4yF_ 2.50 de novo protein Chain: F: cross-alpha amyloid-like structure alphaamg;
c5y6iB_ 2.52 transcription Chain: B: transcriptional regulator kdgr;
c6c14A_ 4.50 membrane protein, metal transport Chain: A: protocadherin-15;
c6gdtC_ 3.17 carbohydrate Chain: C: endoglucanase-related protein;
c6bwfC_ 4.10 membrane protein Chain: C: trpm7;
c5yf4A_ 1.90 protein binding Chain: A: mob-like protein phocein;
c5xybB_ 2.20 peptide binding protein Chain: B: aimr transcriptional regulator;
c6gunB_ 2.00 hydrolase Chain: B: estb from aspergillus nidulans;
c6c4zG_ 3.30 de novo protein Chain: G: cross-alpha amyloid-like structure alphaamg - low
c6c4yE_ 2.50 de novo protein Chain: E: cross-alpha amyloid-like structure alphaamg;
c6c4yP_ 2.50 de novo protein Chain: P: cross-alpha amyloid-like structure alphaamg;
c6c51B_ 2.00 de novo protein Chain: B: cross-alpha amyloid-like structure alphaaml;
c6c52B_ 1.60 de novo protein Chain: B: cross-alpha amyloid-like structure alphatet;
c6c4zN_ 3.30 de novo protein Chain: N: cross-alpha amyloid-like structure alphaamg - low
c6c4zK_ 3.30 de novo protein Chain: K: cross-alpha amyloid-like structure alphaamg - low
c6c4zR_ 3.30 de novo protein Chain: R: cross-alpha amyloid-like structure alphaamg - low
c6c52A_ 1.60 de novo protein Chain: A: cross-alpha amyloid-like structure alphatet;
c6c52D_ 1.60 de novo protein Chain: D: cross-alpha amyloid-like structure alphatet;
c6c4yC_ 2.50 de novo protein Chain: C: cross-alpha amyloid-like structure alphaamg;
c6c4yK_ 2.50 de novo protein Chain: K: cross-alpha amyloid-like structure alphaamg;
c6c4zE_ 3.30 de novo protein Chain: E: cross-alpha amyloid-like structure alphaamg - low
c5y4uA_ 1.70 oxidoreductase Chain: A: monothiol glutaredoxin-3;
c6c4yA_ 2.50 de novo protein Chain: A: cross-alpha amyloid-like structure alphaamg;
c6c4xE_ 3.55 de novo protein Chain: E: cross-alpha amyloid-like membrane peptide alpha-ammem;
c6c4zP_ 3.30 de novo protein Chain: P: cross-alpha amyloid-like structure alphaamg - low
c6c4xD_ 3.55 de novo protein Chain: D: cross-alpha amyloid-like membrane peptide alpha-ammem;
c5y2dA_ 3.70 hydrolase Chain: A: periplasmic serine endoprotease degp-like;
c5zc3B_ 3.01 immunosuppressant Chain: B: rxlr effector;
c6c4yL_ 2.50 de novo protein Chain: L: cross-alpha amyloid-like structure alphaamg;
c6cceD_ 3.05 transcription/dna/antibiotic Chain: D: dna-directed rna polymerase subunit beta';
c6c4zL_ 3.30 de novo protein Chain: L: cross-alpha amyloid-like structure alphaamg - low
c6c4zQ_ 3.30 de novo protein Chain: Q: cross-alpha amyloid-like structure alphaamg - low
c6c4zF_ 3.30 de novo protein Chain: F: cross-alpha amyloid-like structure alphaamg - low
c6c4zC_ 3.30 de novo protein Chain: C: cross-alpha amyloid-like structure alphaamg - low
c6c4yH_ 2.50 de novo protein Chain: H: cross-alpha amyloid-like structure alphaamg;
c6c4yN_ 2.50 de novo protein Chain: N: cross-alpha amyloid-like structure alphaamg;
c6bwdA_ 3.70 membrane protein Chain: A: transient receptor potential cation channel subfamily m
c6c14B_ 4.50 membrane protein, metal transport Chain: B: lhfpl tetraspan subfamily member 5 protein;
c6c51D_ 2.00 de novo protein Chain: D: cross-alpha amyloid-like structure alphaaml;
c6c4zJ_ 3.30 de novo protein Chain: J: cross-alpha amyloid-like structure alphaamg - low
c5zmbA_ UNK protein binding Chain: A: ubiquintin-like protein;
c6bwfA_ 4.10 membrane protein Chain: A: trpm7;
c6c4yQ_ 2.50 de novo protein Chain: Q: cross-alpha amyloid-like structure alphaamg;
c6c4yG_ 2.50 de novo protein Chain: G: cross-alpha amyloid-like structure alphaamg;
c6c4xA_ 3.55 de novo protein Chain: A: cross-alpha amyloid-like membrane peptide alpha-ammem;
c6c4zA_ 3.30 de novo protein Chain: A: cross-alpha amyloid-like structure alphaamg - low
c6bwdC_ 3.70 membrane protein Chain: C: transient receptor potential cation channel subfamily m
c6c4xG_ 3.55 de novo protein Chain: G: cross-alpha amyloid-like membrane peptide alpha-ammem;
c6grwA_ 1.50 hydrolase Chain: A: putative acetyl xylan esterase;
c6c4zB_ 3.30 de novo protein Chain: B: cross-alpha amyloid-like structure alphaamg - low
c6gbiA_ 1.25 structural protein Chain: A: ly6/plaur domain-containing protein 6;
c6c4yJ_ 2.50 de novo protein Chain: J: cross-alpha amyloid-like structure alphaamg;
c6c4zM_ 3.30 de novo protein Chain: M: cross-alpha amyloid-like structure alphaamg - low
c6bwfB_ 4.10 membrane protein Chain: B: trpm7;
c6c4xF_ 3.55 de novo protein Chain: F: cross-alpha amyloid-like membrane peptide alpha-ammem;
c6e4jA_ UNK unknown function Chain: A: uncharacterized protein pf2048.1;
c6fgzA_ 7.00 lipid binding protein Chain: A: dynamin;
c6df3C_ 2.15 cytokine Chain: C: interleukin-24;
c6c4zH_ 3.30 de novo protein Chain: H: cross-alpha amyloid-like structure alphaamg - low
c6a8mA_ 1.70 dna binding protein Chain: A: fact complex subunit spt16;
c6c4zO_ 3.30 de novo protein Chain: O: cross-alpha amyloid-like structure alphaamg - low
c6bwfD_ 4.10 membrane protein Chain: D: trpm7;
c6c51A_ 2.00 de novo protein Chain: A: cross-alpha amyloid-like structure alphaaml;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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