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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bwfD_

Fold library idPDB HeaderMoleculeTitle
c6bwfD_4.10PDB header: membrane proteinChain: D: PDB Molecule: trpm7;


Added to library: Sat Aug 18 08:41:48 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

TT



B




SS
T







GGGG

TTTTS

ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFLTIPRLEELYNTKQGPTN
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Known secondary structure (DSSP) T

S




B
SSTTB







TTTTTS










TT

ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence PMLFHLIYKITLIDIGLVIEYLMGGTYRCTYTRKRFRLIYNSLGGNNRRSGRNTSSSTPQLRKSHKMRHN
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Known secondary structure (DSSP) TSSSS



TTTS
TTT
S
GGGGBTTB

SSS
S
SSSTTTTTTSS



SS

STT





GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence HFIKTAQPYRPKMDSMEEGKKKRTKDRFPYPLNELLIWACLMKRQVMARFLWQHGEESMAKALVACKIYR
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Known secondary structure (DSSP) G

STTSS
SS



TTST


S
STT

TTTTTTSSSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SMAYEAKQSDSEELKQYSNDFGQLAVELLEQSFRQDETMAMKLLTYELKNWSNSTCLKLAVSSRRPFVAH
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Known secondary structure (DSSP)


TTSS
GGGSS


STTT

SSTTSSS


TTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TCTQMLLSDMWMGRLNMWYKVILSILVPPAILMLEYKTKAEMSHIPQSQDAHQRKFYAFYHAPIVKFWFN
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Known secondary structure (DSSP) TTTTTTTT



S
GGGGGGS




TTTTSSS


S


TTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TLAYLGFLMLYTFVVLVKMEQLPSVQEWIVIAYIFTYAIEKVREVFQKIKVWFSDYFNVSDTIAIISFFV
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Known secondary structure (DSSP) SS


SS

SSTTTTT

TTSSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence GFGLRFGAKWNYINAYDNHVFVAGRLIYCLNIIFWYVRLLDFLAVNQQAGPYVMMIGKMVANMFYIVVIM
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Known secondary structure (DSSP) TTTT





STT

SSSTTGGGTTTTTTSTTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ALVLLSFGVPRKAILYPHEEPSWSLAKDIVFHPYWMIFGEVYAYEIDVCANDSTLPTICGPGTWLTPFLQ
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Known secondary structure (DSSP)
SS



S
TTTTT


GGGSSSS
SS

S




TT
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence AVYLFVQYIIMVNLLIAFFNNVYLQVKAISNIVWKYQRYHFIMAYHEKPVLPPPLIILSHGPKLFLTEED
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Known secondary structure (DSSP) BTTTBTTTTTSSSTT
S


SS
T







 .........710.........720.........730.........740.........750.........760......
Sequence QKKLHDFEEQCVEMYFDEKDDKFNSGSEERIRVTFERVEQMSIQIKEVGDRVNYIKRSLQSLDSQI
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Known secondary structure (DSSP) TSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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