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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y2dA_

Fold library idPDB HeaderMoleculeTitle
c5y2dA_3.70PDB header: hydrolaseChain: A: PDB Molecule: periplasmic serine endoprotease degp-like;


Added to library: Sat Aug 18 08:52:26 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ERVSVPSKDDTIYSYHDSIKDSIKAVVNISERMERALGSGVIISKDGYIVTNNHVIDGADKIKVTIPGSN
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Known secondary structure (DSSP)



S

SSS



TTT



S





SSSS
TT
SSB
SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEYSATLVGTDSESDLAVIRITKDNLPTIKFSDSNDISVGDLVFAIGNPFGESVTQGIVSALNKENFIQT
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TTTT

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TTT

TT








 .........150.........160.........170.........180.........190.........200.........210
Sequence DASINPGNSGGALIDSRGGLVGINTAIIGIGFAIPSNMVKDTVTQLIKTGKIERGYLSVEKDSPAKKAGI
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Known secondary structure (DSSP)
S


TTTTTSTTS





SSS


B






STTSTT

 .........220.........230.........240.........250.........260
Sequence LVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVKERAFTLTLAERK
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Known secondary structure (DSSP)

SS


TT

SSSSSTTS
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B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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