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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6c13A_

Fold library idPDB HeaderMoleculeTitle
c6c13A_11.33PDB header: membrane proteinChain: A: PDB Molecule: protocadherin-15;


Added to library: Sat Aug 18 08:55:42 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPVFTNSTYTVVVEENLPAGTSFLQIEAKDVDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAF
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Known secondary structure (DSSP)
S
S
SS

TT



B

SSS
S

S
SSSTTT
TTT
BSS


GGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PDQEASITFLAEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADP
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Known secondary structure (DSSP)
TT
SS
SS

SS






S


BS
S


TT

TT



B

B


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PGMPASRVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVRIL
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Known secondary structure (DSSP)
SSGGG



SS
TT
TTT
BSS




SS



SSSS

B



 .........220.........230.........240.........250.........260.........270.........280
Sequence VLHPGEIPRFTQEEYRPPPVSELAARGTVVGVISAAAINQSIVYSIVAGNEEDKFGINNVTGVIYVNSPL
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Known secondary structure (DSSP)


S

S
S
S



B
TT

TT



SS


S
TT


TTT
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence DYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDHPPVFQKKFYIGGVSEDARMFASVLR
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Known secondary structure (DSSP)
SSS
SB


TT




STT

BB




S
S
SSS

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VKATDRDTGNYSAMAYRLIIPPIKEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGK
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Known secondary structure (DSSP)

SS



S





GGG




B
TTT


S

TT

S
STTT
S

 .........430.........440.........450.........460.........470.........480.........490
Sequence ADVLVSVVNQLDMQVIVSNVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAYSLEDYSK
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Known secondary structure (DSSP)
TTS
SS
TTTSSS
S

SSSS



TTS
 .........500.........510.........520.........530.........540..
Sequence CDLTVYAIDPQTNRAIDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTP
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Known secondary structure (DSSP) TTTT

TT
TT
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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