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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gdtC_

Fold library idPDB HeaderMoleculeTitle
c6gdtC_3.17PDB header: carbohydrateChain: C: PDB Molecule: endoglucanase-related protein;


Added to library: Sat Aug 18 08:34:15 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLLLTNHIGYETQGPKQAVLLCGQTQLMDDCVLLVCARSHQTVAKLAIEWHGKVDNWHQGQFHRIDFSDF
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Known secondary structure (DSSP)


SSTTS

S
SS
SS
TTT



TT
TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TTPGDYYLRLEHTHSATFTIARGVLMQRTFSDVLHYFKSQRCSGQFDQQDKQVPLLSTSTTADVHGGWYD
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Known secondary structure (DSSP)


TT


TTTB

TTSBTTSS




SB

 .........150.........160.........170.........180.........190.........200.........210
Sequence ASGDVSKYLSHLSYANYLNPQQTPLVVWNMLKGLAVLQHHSGFASFSRTRLKDEALFGADFLRRMQNSEG
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Known secondary structure (DSSP) BTTB

S


GGGSS




TT
TTS
TB
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FFYMTVFDKWSKDTKQREICAYATQQGHKSDDYQAGFRQGGGMAIAALAAAARLDTHGEFTQADYLQAAE
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Known secondary structure (DSSP)
BB

TT


STT
TTTTS

B

TTTTTTSSS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NGYWHLKEHNLAYLNDGVENIIDEYCALLACCELYRTTENDQYLAQAREWAQRLAKRQCSDEQIAHYWSA
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Known secondary structure (DSSP) STTS




TTTTBS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TSNGERPYFHASDAGLPVIALCEYLNIETDTANYAQLQRVVEQACQFELAITQQVSNPFGYPRQYVKGVE
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Known secondary structure (DSSP) SSSSSSB


SS
TTTT


TSS

TT





TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SAKRTSFFIAQDNESGYWWQGENARLASLASMAYLAQPHLSTAIAKPLEQWSQNALNWIVGLNPYNMCML
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Known secondary structure (DSSP) S

SS

SS
TTSS




GGGS
TTTTT
STT



B
 .........500.........510.........520.........530.........540.........550.........560
Sequence DGHGHNNPDYLPHLGFFNAKGGVCNGITAGFDDPRDIAFNPAGQKDDMLQNWRWGEQWIPHGAWYLLAII
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Known secondary structure (DSSP) TTSSS




BGGGTB


TT
BB



SS
TTSSS
T
TTTT
BB
 ......
Sequence SQFAHF
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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