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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6a8mA_

Fold library idPDB HeaderMoleculeTitle
c6a8mA_1.70PDB header: dna binding proteinChain: A: PDB Molecule: fact complex subunit spt16;


Added to library: Sat Aug 18 08:40:29 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EVIIDFSTFENRLLALRDRFPSFDGSPSSLVFILGSADEENPYQKTTILHNWLLGYEFPTTLIAVFKEGC
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Known secondary structure (DSSP)




GGGSTT

S
S

TT
TT
SS

SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVITSAAKTRYLEEGVAQMNKKLENTFKIELWQSSKEPGHNLKLFEDLVERVREAGSAVGLATKDSYQGK
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Known secondary structure (DSSP)
TTTT


SSTT
S
TT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence FITEWKGVWDTAVEKHGLNGVDVSLGLSSLWAVKDEKEQAYLQVSSRGSDKFMNLLSDELVRAVDEEIKI
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Known secondary structure (DSSP) S



S

TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence TDAKLSDNVENEIDKSRFLKKLSPELTPLCPKGEKFDVNYLDWAYSPIIQSGPKYDLRVSARSSETQLDG
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Known secondary structure (DSSP) BGGG
TTGGGS
TT



GGGSS


SSS


STT



SSB


 .........290.........300.........310.........320.........330.........340.........350
Sequence NGCILASCGIRYKNYCSNISRTFLIDPSDEMTDNYDFLLLLQEEIINNLLRVGATPKQIYDGAVNYINSK
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Known secondary structure (DSSP) S
TT

S

TT

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence KPELSAGFTKNVGSLMGLEFRDSQFVLNNKNDYRKVENGDCFNISLGFNNLKDSKTGASYALQLADTVQL
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Known secondary structure (DSSP)
GGGTTTB
S
SSSSS
TTSSS

S



TT

TTT

 .........430.........440..
Sequence TSGGPKVLTNYTKSRSQISFYF
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Known secondary structure (DSSP) TT


S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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