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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bwdB_

Fold library idPDB HeaderMoleculeTitle
c6bwdB_3.70PDB header: membrane proteinChain: B: PDB Molecule: transient receptor potential cation channel subfamily m


Added to library: Sat Aug 18 08:52:48 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)

TT


B




SS
TT







TT


TTS

ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFLTIPRLEELYNTKQGPT
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Known secondary structure (DSSP) T

S




B
SSS
B


SS

TTS










TTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NPMLFHLIYKITLIDIGLVIEYLMGGTYRCTYTRKRFRLIYNSLGGNNRRSGRNTSSSTPQLRKSHKMRH
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Known secondary structure (DSSP) TTSSSS




TTT
GGGGGGBTTB

SSS
S
SSSTTTTTTSS


SSS

SSTTTTTTT



G
 .........220.........230.........240.........250.........260.........270.........280
Sequence NHFIKTAQPYRPKMDASMEEGKKKRTKDKRFPYPLNELLIWACLMKRQVMARFLWQHGEESMAKALVACK
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Known secondary structure (DSSP) GGTTSTTSS
SS



SS
ST



SSSTT
TTTSSSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IYRSMAYEAKQSDTSEELKQYSNDFGQLAVELLEQSFRQDETMAMKLLTYELKNWSNSTCLKLAVSSRLR
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Known secondary structure (DSSP) TTTS


GGGTTTTSSSSS
GGGTT


STTT

SSTTSSSS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PFVAHTCTQMLLSDMWMGRLNMWYKVILSILVPPAILMLEYKTKAEMSHIPQSQDAHQRKFYAFYHAPIV
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Known secondary structure (DSSP) TTTTSTT



TSSGGGGGGS




SGGGSSS


S


TTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence KFWFNTLAYLGFLMLYTFVVLVKMEQLPSVQEWIVIAYIFTYAIEKVREVFMQKIKVWFSDYFNVSDTIA
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Known secondary structure (DSSP) S


SSS
SST

TTTSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence IISFFVGFGLRFGAKWNYINAYDNHVFVAGRLIYCLNIIFWYVRLLDFLAVNQQAGPYVMMIGKMVANMF
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Known secondary structure (DSSP) TTTT




TTT


SSSTSSSTTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence YIVVIMALVLLSFGVPRKAILYPHEEPSWSLAKDIVFHPYWMIFGEVYAYEIDVCANDSTLPTICGPGTW
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Known secondary structure (DSSP)

S



S
TTTTT


TTSSSSS
SS

S




TTTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence LTPFLQAVYLFVQYIIMVNLLIAFFNNVYLQVKAISNIVWKYQRYHFIMAYHEKPVLPPPLIILSHIGPK
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Known secondary structure (DSSP) STTTTTTTTTTSSSTTT
S


SS
TTTGGGT




 .........710.........720.........730.........740.........750.........760.........770
Sequence LFLTEEDQKKLHDFEEQCVEMYFDEKDDKFNSGSEERIRVTFERVEQMSIQIKEVGDRVNYIKRSLQSLD
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Known secondary structure (DSSP)



GGGSS
TTS
 .
Sequence S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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