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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6dhiD_

Fold library idPDB HeaderMoleculeTitle
c6dhiD_3.10PDB header: plant protein, hydrolaseChain: D: PDB Molecule: asparaginyl endopeptidase;


Added to library: Sat Aug 18 08:31:54 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GTRWAVLVAGSKGYVNYRHQADVCHAYQILKKGGLKDENIIVFMYDDIAYNESNPHPGVIINHPYGSDVY
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Known secondary structure (DSSP)





SGGGT

GGG

S
STT
TT
SSTT


SSTT




 .........80.........90.........100.........110.........120.........130.........140
Sequence KGVPKDYVGEDINPPNFYAVLLANKSALTGTGSGKVLDSGPNDHVFIYYTHGGAGVLGMPSKPYIAASDL
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Known secondary structure (DSSP) TT


SB
GGG
STT
GGG

SS








TT

-
BTT

SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NDVLKKKHASGTYKSIVFYVESCESGSMFDGLLPEDHNIYVMGASDTGESSWVTYCPLQHPSPPPEYDVC
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Known secondary structure (DSSP) T

S
STTGGGGTTTTS
TTSSSS
TT


BS
SSSTT


TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGDLFSVAWLEDCDVHNLQTETFQQQYEVVKNKHVVQYGDVGLSKQTLFVYMGVSQRDADLIHYWEKYRR
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Known secondary structure (DSSP)
TTSS
STT
B



GGGGGSBGGGT


BT
 .........290.........300.........310.........320.........330.........340.........350
Sequence APEGSSRKAEAKKQLREVMAHRMHIDNSVKHIGKLLFGIEKGHKMLNNVRPAGLPVVDDWDCFKTLIRTF
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Known secondary structure (DSSP) S
TTST
SSSSS



TTS
S
S
 .........360.........370.........380.........390.........400.....
Sequence ETHCGSLSEYGMKHMRSFANLCNAGIRKEQMAEASAQACVSIPDNPWSSLHAGFS
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Known secondary structure (DSSP) S


TTTGGGGT








GGG

TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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