Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5y28B_

Fold library idPDB HeaderMoleculeTitle
c5y28B_3.09PDB header: hydrolaseChain: B: PDB Molecule: periplasmic serine endoprotease degp-like;


Added to library: Sat Aug 18 08:33:22 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IQIQSMPKVKERVSVPSKDDTIYSYHDSIKDSIKAVVNISTEKMERALGSGVIISKDGYIVTNNHVIDGA
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)













S


SS



STT



TT
STTS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DKIKVTIPNKEYSATLVGTDSESDLAVIRITKDNLPTIKFSDSNDISVGDLVFAIGNPFGVGESVTQGIV
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) SS






TTTT
S
SS




B

GGG

TT

SSSS

 .........150.........160.........170.........180.........190.........200..
Sequence SALFIQTDASINPGNSGGALIDSRGGLVGINTAIIHGIGFAIPSNMVKDTVTQLIKTGKIER
Predicted secondary structure




















SS confidence





























































Known secondary structure (DSSP)

SS


TTTTTS
SSS






SSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D