1 c1c0mA_
100.0
19
PDB header: transferaseChain: A: PDB Molecule: protein (integrase);PDBTitle: crystal structure of rsv two-domain integrase
2 d1asua_
100.0
18
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Retroviral integrase, catalytic domain3 c3f9kV_
100.0
10
PDB header: viral protein, recombinationChain: V: PDB Molecule: integrase;PDBTitle: two domain fragment of hiv-2 integrase in complex with ledgf ibd
4 d1c0ma2
100.0
19
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Retroviral integrase, catalytic domain5 c3l2tB_
100.0
20
PDB header: recombination/dnaChain: B: PDB Molecule: integrase;PDBTitle: crystal structure of the prototype foamy virus (pfv) intasome in2 complex with magnesium and mk0518 (raltegravir)
6 c1ex4A_
100.0
14
PDB header: viral proteinChain: A: PDB Molecule: integrase;PDBTitle: hiv-1 integrase catalytic core and c-terminal domain
7 c1k6yB_
100.0
16
PDB header: transferaseChain: B: PDB Molecule: integrase;PDBTitle: crystal structure of a two-domain fragment of hiv-1 integrase
8 c3hpgC_
99.9
18
PDB header: transferaseChain: C: PDB Molecule: integrase;PDBTitle: visna virus integrase (residues 1-219) in complex with ledgf2 ibd: examples of open integrase dimer-dimer interfaces
9 c3dlrA_
99.9
21
PDB header: transferaseChain: A: PDB Molecule: integrase;PDBTitle: crystal structure of the catalytic core domain from pfv2 integrase
10 c3kksB_
99.9
13
PDB header: dna binding proteinChain: B: PDB Molecule: integrase;PDBTitle: crystal structure of catalytic core domain of biv integrase in crystal2 form ii
11 c3nf9A_
99.9
16
PDB header: hydrolase/hydrolase inhibitorChain: A: PDB Molecule: integrase;PDBTitle: structural basis for a new mechanism of inhibition of hiv integrase2 identified by fragment screening and structure based design
12 d1cxqa_
99.9
19
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Retroviral integrase, catalytic domain13 d1exqa_
99.9
14
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Retroviral integrase, catalytic domain14 d1hyva_
99.9
16
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Retroviral integrase, catalytic domain15 d1c6va_
99.9
10
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Retroviral integrase, catalytic domain16 c1rthA_
99.5
16
PDB header: nucleotidyltransferaseChain: A: PDB Molecule: hiv-1 reverse transcriptase;PDBTitle: high resolution structures of hiv-1 rt from four rt-2 inhibitor complexes
17 c1mu2A_
99.5
21
PDB header: transferaseChain: A: PDB Molecule: hiv-2 rt;PDBTitle: crystal structure of hiv-2 reverse transcriptase
18 d2zd1b1
99.3
14
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: Reverse transcriptase19 c3kk1B_
99.3
15
PDB header: transferase/dnaChain: B: PDB Molecule: reverse transcriptase p51 subunit;PDBTitle: hiv-1 reverse transcriptase-dna complex with nuceotide inhibitor gs-2 9148-diphosphate bound in nucleotide site
20 d1mu2a2
99.2
17
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: Reverse transcriptase21 d1bcoa2
not modelled
99.1
14
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: mu transposase, core domain22 c1bcoA_
not modelled
98.9
15
PDB header: transposaseChain: A: PDB Molecule: bacteriophage mu transposase;PDBTitle: bacteriophage mu transposase core domain
23 c2opqA_
not modelled
98.8
14
PDB header: transferaseChain: A: PDB Molecule: reverse transcriptase/ribonuclease h;PDBTitle: crystal structure of l100i mutant hiv-1 reverse2 transcriptase in complex with gw420867x.
24 d1ztwa1
not modelled
98.6
12
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: Reverse transcriptase25 d1hara_
not modelled
98.2
18
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: Reverse transcriptase26 c2ehgA_
not modelled
98.1
15
PDB header: hydrolaseChain: A: PDB Molecule: ribonuclease hi;PDBTitle: crystal structure of hyperthermophilic archaeal rnase hi
27 c3hstD_
not modelled
98.1
11
PDB header: hydrolaseChain: D: PDB Molecule: protein rv2228c/mt2287;PDBTitle: n-terminal rnase h domain of rv2228c from mycobacterium tuberculosis2 as a fusion protein with maltose binding protein
28 d1jl2a_
not modelled
97.9
21
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H29 d1rw3a_
not modelled
97.9
14
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: Reverse transcriptase30 c2qkkI_
not modelled
97.8
15
PDB header: hydrolase/dna/rnaChain: I: PDB Molecule: ribonuclease h1;PDBTitle: human rnase h catalytic domain mutant d210n in complex with2 14-mer rna/dna hybrid
31 c2kq2A_
not modelled
97.7
18
PDB header: hydrolaseChain: A: PDB Molecule: ribonuclease h-related protein;PDBTitle: solution nmr structure of the apo form of a ribonuclease h2 domain of protein dsy1790 from desulfitobacterium3 hafniense, northeast structural genomics target dhr1a
32 d1s9ga1
not modelled
97.6
16
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H33 c3u3gA_
not modelled
97.6
18
PDB header: hydrolaseChain: A: PDB Molecule: ribonuclease h;PDBTitle: structure of lc11-rnase h1 isolated from compost by metagenomic2 approach: insight into the structural bases for unusual enzymatic3 properties of sto-rnase h1
34 c2hb5A_
not modelled
97.5
16
PDB header: hydrolaseChain: A: PDB Molecule: reverse transcriptase/ribonuclease h;PDBTitle: crystal structure of the moloney murine leukemia virus2 rnase h domain
35 d1wsib_
not modelled
97.5
20
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H36 d1jlaa1
not modelled
97.5
14
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H37 d1s1ta1
not modelled
97.5
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H38 c2e4lA_
not modelled
97.5
21
PDB header: hydrolaseChain: A: PDB Molecule: ribonuclease hi;PDBTitle: thermodynamic and structural analysis of thermolabile rnase hi from2 shewanella oneidensis mr-1
39 d1jl1a_
not modelled
97.5
20
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H40 c3h08B_
not modelled
97.4
16
PDB header: hydrolaseChain: B: PDB Molecule: rnh (ribonuclease h);PDBTitle: crystal structure of the ribonuclease h1 from chlorobium2 tepidum
41 d1rila_
not modelled
97.3
13
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H42 d1mu2a1
not modelled
97.3
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H43 d1o1wa_
not modelled
97.2
17
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H44 c3hosA_
not modelled
97.2
7
PDB header: transferase, dna binding protein/dnaChain: A: PDB Molecule: transposable element mariner, complete cds;PDBTitle: crystal structure of the mariner mos1 paired end complex with mg
45 d1eeta1
not modelled
97.2
13
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H46 d1zbfa1
not modelled
94.7
15
Fold: Ribonuclease H-like motifSuperfamily: Ribonuclease H-likeFamily: Ribonuclease H47 c2rpiA_
not modelled
90.1
24
PDB header: hydrolaseChain: A: PDB Molecule: ribonuclease h;PDBTitle: the nmr structure of the submillisecond folding2 intermediate of the thermus thermophilus ribonuclease h
48 c3f2kB_
not modelled
80.0
5
PDB header: transferaseChain: B: PDB Molecule: histone-lysine n-methyltransferase setmar;PDBTitle: structure of the transposase domain of human histone-lysine2 n-methyltransferase setmar
49 d1sqha_
not modelled
70.7
8
Fold: Acyl-CoA N-acyltransferases (Nat)Superfamily: Acyl-CoA N-acyltransferases (Nat)Family: Hypothetical protein cg14615-pa50 c3du6A_
not modelled
60.0
19
PDB header: transferaseChain: A: PDB Molecule: telomerase reverse transcriptase;PDBTitle: structure of the catalytic subunit of telomerase, tert
51 d2d81a1
not modelled
48.3
17
Fold: alpha/beta-HydrolasesSuperfamily: alpha/beta-HydrolasesFamily: PHB depolymerase-like52 c2zf8A_
not modelled
46.2
21
PDB header: structural proteinChain: A: PDB Molecule: component of sodium-driven polar flagellar motor;PDBTitle: crystal structure of moty
53 c2jtmA_
not modelled
27.9
24
PDB header: dna binding proteinChain: A: PDB Molecule: putative uncharacterized protein;PDBTitle: solution structure of sso6901 from sulfolobus solfataricus2 p2
54 d2hqsc1
not modelled
27.8
12
Fold: Bacillus chorismate mutase-likeSuperfamily: OmpA-likeFamily: OmpA-like55 d2pt0a1
not modelled
27.7
16
Fold: (Phosphotyrosine protein) phosphatases IISuperfamily: (Phosphotyrosine protein) phosphatases IIFamily: Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA56 c1u24A_
not modelled
23.2
16
PDB header: hydrolaseChain: A: PDB Molecule: myo-inositol hexaphosphate phosphohydrolase;PDBTitle: crystal structure of selenomonas ruminantium phytase
57 c2k1sA_
not modelled
21.9
7
PDB header: lipoproteinChain: A: PDB Molecule: inner membrane lipoprotein yiad;PDBTitle: solution nmr structure of the folded c-terminal fragment of yiad from2 escherichia coli. northeast structural genomics consortium target3 er553.
58 d2aizp1
not modelled
20.9
7
Fold: Bacillus chorismate mutase-likeSuperfamily: OmpA-likeFamily: OmpA-like59 c3nnqA_
not modelled
20.1
22
PDB header: viral proteinChain: A: PDB Molecule: n-terminal domain of moloney murine leukemia virusPDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3
60 c2b9kA_
not modelled
19.8
26
PDB header: antibioticChain: A: PDB Molecule: antimicrobial peptide lci;PDBTitle: solution structure of lci, an amp from bacillus subtilis
61 c3g3sA_
not modelled
18.6
14
PDB header: transferaseChain: A: PDB Molecule: gcn5-related n-acetyltransferase;PDBTitle: crystal structure of gcn5-related n-acetyltransferase-like protein2 (zp_00874857) (zp_00874857.1) from streptococcus suis 89/1591 at 1.803 a resolution
62 c3dcgF_
not modelled
18.4
25
PDB header: ligase/viral proteinChain: F: PDB Molecule: virion infectivity factor;PDBTitle: crystal structure of the hiv vif bc-box in complex with human elonginb2 and elonginc
63 c2kgwA_
not modelled
18.2
10
PDB header: membrane proteinChain: A: PDB Molecule: outer membrane protein a;PDBTitle: solution structure of the carboxy-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis
64 c2l26A_
not modelled
17.9
9
PDB header: membrane proteinChain: A: PDB Molecule: uncharacterized protein rv0899/mt0922;PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains
65 d1wwia1
not modelled
17.8
9
Fold: Histone-foldSuperfamily: Histone-foldFamily: Bacterial histone-fold protein66 c2pdoG_
not modelled
17.6
15
PDB header: transferaseChain: G: PDB Molecule: acetyltransferase ypea;PDBTitle: crystal structure of the putative acetyltransferase of gnat family2 from shigella flexneri
67 c3cjeA_
not modelled
17.2
3
PDB header: oxidoreductaseChain: A: PDB Molecule: osmc-like protein;PDBTitle: crystal structure of an osmc-like hydroperoxide resistance protein2 (jann_2040) from jannaschia sp. ccs1 at 1.70 a resolution
68 d1fgja_
not modelled
17.1
16
Fold: Multiheme cytochromesSuperfamily: Multiheme cytochromesFamily: Di-heme elbow motif69 c1fgjA_
not modelled
17.1
16
PDB header: oxidoreductaseChain: A: PDB Molecule: hydroxylamine oxidoreductase;PDBTitle: x-ray structure of hydroxylamine oxidoreductase
70 c2f7tA_
not modelled
17.0
8
PDB header: dna binding proteinChain: A: PDB Molecule: mos1 transposase;PDBTitle: crystal structure of the catalytic domain of mos1 mariner2 transposase
71 c2cntD_
not modelled
16.7
9
PDB header: transferaseChain: D: PDB Molecule: modification of 30s ribosomal subunit protein s18;PDBTitle: rimi - ribosomal s18 n-alpha-protein acetyltransferase in2 complex with coenzymea.
72 d1ecfa1
not modelled
16.3
22
Fold: PRTase-likeSuperfamily: PRTase-likeFamily: Phosphoribosyltransferases (PRTases)73 c2yc2D_
not modelled
16.1
10
PDB header: transport proteinChain: D: PDB Molecule: small rab-related gtpase;PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas
74 c2qiyC_
not modelled
15.9
50
PDB header: signaling protein/hydrolaseChain: C: PDB Molecule: ubiquitin carboxyl-terminal hydrolase 3;PDBTitle: yeast deubiquitinase ubp3 and bre5 cofactor complex
75 c2jeuA_
not modelled
15.3
23
PDB header: transcriptionChain: A: PDB Molecule: regulatory protein e2;PDBTitle: transcription activator structure reveals redox control of2 a replication initiation reaction
76 c3e0dA_
not modelled
14.9
22
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase iii subunit alpha;PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit
77 d1z3aa1
not modelled
14.2
25
Fold: Cytidine deaminase-likeSuperfamily: Cytidine deaminase-likeFamily: Deoxycytidylate deaminase-like78 c3c5iD_
not modelled
14.1
13
PDB header: transferaseChain: D: PDB Molecule: choline kinase;PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520
79 c1trlB_
not modelled
14.0
22
PDB header: hydrolase (metalloprotease)Chain: B: PDB Molecule: thermolysin fragment 255 - 316;PDBTitle: nmr solution structure of the c-terminal fragment 255-3162 of thermolysin: a dimer formed by subunits having the3 native structure
80 c1tueG_
not modelled
13.7
18
PDB header: replicationChain: G: PDB Molecule: regulatory protein e2;PDBTitle: the x-ray structure of the papillomavirus helicase in2 complex with its molecular matchmaker e2
81 c1jr2A_
not modelled
13.6
24
PDB header: lyaseChain: A: PDB Molecule: uroporphyrinogen-iii synthase;PDBTitle: structure of uroporphyrinogen iii synthase
82 d1jr2a_
not modelled
13.6
24
Fold: HemD-likeSuperfamily: HemD-likeFamily: HemD-like83 d1u09a_
not modelled
13.5
11
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: RNA-dependent RNA-polymerase84 d1raja_
not modelled
13.2
13
Fold: DNA/RNA polymerasesSuperfamily: DNA/RNA polymerasesFamily: RNA-dependent RNA-polymerase85 c2dbqA_
not modelled
13.0
10
PDB header: oxidoreductaseChain: A: PDB Molecule: glyoxylate reductase;PDBTitle: crystal structure of glyoxylate reductase (ph0597) from pyrococcus2 horikoshii ot3, complexed with nadp (i41)
86 d1w79a1
not modelled
12.9
16
Fold: beta-lactamase/transpeptidase-likeSuperfamily: beta-lactamase/transpeptidase-likeFamily: Dac-like87 d1gph11
not modelled
12.8
17
Fold: PRTase-likeSuperfamily: PRTase-likeFamily: Phosphoribosyltransferases (PRTases)88 d1qqha_
not modelled
12.8
18
Fold: E2 regulatory, transactivation domainSuperfamily: E2 regulatory, transactivation domainFamily: E2 regulatory, transactivation domain89 c3f2rA_
not modelled
12.7
14
PDB header: transferaseChain: A: PDB Molecule: choline kinase alpha;PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3
90 c3td4D_
not modelled
12.0
11
PDB header: membrane protein,peptide binding proteinChain: D: PDB Molecule: outer membrane protein omp38;PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate
91 c2yt5A_
not modelled
11.7
18
PDB header: transcriptionChain: A: PDB Molecule: metal-response element-binding transcriptionPDBTitle: solution structure of the phd domain of metal-response2 element-binding transcription factor 2
92 c1lqlE_
not modelled
11.5
3
PDB header: unknown functionChain: E: PDB Molecule: osmotical inducible protein c like family;PDBTitle: crystal structure of osmc like protein from mycoplasma2 pneumoniae
93 d1lqla_
not modelled
11.5
3
Fold: OsmC-likeSuperfamily: OsmC-likeFamily: Ohr/OsmC resistance proteins94 c2lezA_
not modelled
11.3
12
PDB header: signaling proteinChain: A: PDB Molecule: secreted effector protein pipb2;PDBTitle: solution nmr structure of n-terminal domain of salmonella effector2 protein pipb2. northeast structural genomics consortium (nesg) target3 stt318a
95 d1ufra_
not modelled
11.1
19
Fold: PRTase-likeSuperfamily: PRTase-likeFamily: Phosphoribosyltransferases (PRTases)96 c1qqgA_
not modelled
11.0
24
PDB header: signal transductionChain: A: PDB Molecule: insulin receptor substrate 1;PDBTitle: crystal structure of the ph-ptb targeting region of irs-1
97 c2px2B_
not modelled
10.7
21
PDB header: transferaseChain: B: PDB Molecule: genome polyprotein [contains: capsid protein cPDBTitle: crystal structure of the murray valley encephalitis virus2 ns5 2'-o methyltransferase domain in complex with sah3 (monoclinic form 1)
98 d2ffja1
not modelled
10.7
15
Fold: AF1104-likeSuperfamily: AF1104-likeFamily: AF1104-like99 d1ckqa_
not modelled
10.6
22
Fold: Restriction endonuclease-likeSuperfamily: Restriction endonuclease-likeFamily: Restriction endonuclease EcoRI
