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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1bcoA_

Fold library idPDB HeaderMoleculeTitle
c1bcoA_PDB header: transposaseChain: A: PDB Molecule: bacteriophage mu transposase;PDBTitle: bacteriophage mu transposase core domain


Added to library: Tue Mar 16 13:09:08 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EHLDAMQWINGDGYLHNVFVRWFNGDVIRPKTWFWQDVKTRKILGWRCDVSENIDSIRLSFMDVVTRYGI
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Known secondary structure (DSSP)



TTT
SB

TTS


TTT

SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence PEDFHITIDNTRGAANKWLTGGAPNRYRFKVKEDDPKGLFLLMGAKMHWTSVVAGKGWGQAKPVERAFGV
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Known secondary structure (DSSP) SS



TTSTTTTTTS


TTTTBS
B



T

SSS
TT




SS
SSGGGSG
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGLEEYVDKHPALAGAYTGPYGDRAVDAELFLKTLAEGVAMFNARTGRETEMCGGKLSFDDVFEREYART
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Known secondary structure (DSSP) GGGGGTTTT
GGGTTTB



TTT





STTTTTT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IVRKPTEEQKRMLLLPAEAVNVSRKGEFTLKVGGSLKGAKNVYYNMALMNAGVKKVVVRFDPQQLHSTVY
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Known secondary structure (DSSP)



TSB



TTS
TTS


GGGTSSS
S
GGGTTT
 .........290.....
Sequence CYTLDGRFICEAECL
Predicted secondary structure




SS confidence














Known secondary structure (DSSP)
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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