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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3f9kV_

Fold library idPDB HeaderMoleculeTitle
c3f9kV_PDB header: viral protein, recombinationChain: V: PDB Molecule: integrase;PDBTitle: two domain fragment of hiv-2 integrase in complex with2 ledgf ibd


Added to library: Tue Mar 16 13:25:52 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCVNAELGTWQMDCTHLEGKIIIVAVHVA
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Known secondary structure (DSSP)
GGG





TSTT




TTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGV
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Known secondary structure (DSSP) TTSS

TTS





TTTT
T
SS
SSSTTTT
 .........150.........160.........170.........180.........190......
Sequence VEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITT
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Known secondary structure (DSSP) GGG
S
T

BTTTTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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