Fold library entry viewer: c3du6A_

Added to library: Tue Mar 16 13:55:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	V	H	Y	Y	R	L	S	L	K	S	R	Q	K	A	P	K	I	V	N	S	K	Y	N	S	I	L	N	I	A	L	K	N	F	R	L	C	K	K	H	K	T	K	K	P	V	Q	I	L	A	L	L	Q	E	I	I	P	K	S	Y	F	G	T	T	T	N	L	K	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G						S	S			T	T	S		T																		S	S												S		G	G	G	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	K	V	V	E	K	I	L	T	Q	S	S	F	E	C	I	H	L	S	V	L	H	K	C	Y	D	Y	D	A	I	P	W	L	Q	N	V	E	P	N	L	R	P	K	L	L	L	K	H	N	L	F	L	L	D	N	I	V	K	P	I	I	A	F	Y	Y	K	P	I	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		B	T	T					G	G	G	G	T	T	T			G	G	G		G	G	G	T	T	S		G	G	G																T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	N	G	H	E	I	K	F	I	R	K	E	E	Y	I	S	F	E	S	K	V	F	H	K	L	K	K	M	K	Y	L	V	E	V	Q	D	E	V	K	P	R	G	V	L	N	I	I	P	K	Q	D	N	F	R	A	I	V	S	I	F	P	D	S	A	R	K	P	F	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	B																								S	S					S			S			S	S								T	T										S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	L	T	S	K	I	Y	K	V	L	E	E	K	Y	K	T	S	G	S	L	Y	T	C	W	S	E	F	T	Q	K	T	Q	G	Q	I	Y	G	I	K	V	D	I	R	D	A	Y	G	N	V	K	I	P	V	L	C	K	L	I	Q	S	I	P	T	H	L	L	D	S	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S																			S									B	S		T	T	T	T													S		T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	N	F	I	V	D	H	I	S	N	Q	F	V	A	F	R	R	K	I	Y	K	W	N	H	G	L	L	Q	G	D	P	L	S	G	C	L	C	E	L	Y	M	A	F	M	D	R	L	Y	F	S	N	L	D	K	D	A	F	I	H	R	T	V	D	D	Y	F	F	C	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S						S	S	S		B	T	S	T	T																			S	S		T	T	S						S	S							S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	P	H	K	V	Y	D	F	E	L	L	I	K	G	V	Y	Q	V	N	P	T	K	T	R	T	N	L	P	T	H	R	H	P	Q	D	E	I	P	Y	C	G	K	I	F	N	L	T	T	R	Q	V	R	T	L	Y	K	L	P	P	N	Y	E	I	R	H	K	F	K	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T														S		B		T	T	S						T	T	S	S	S			S					T	T					T	T	T											T	T		B	G	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	F	N	N	Q	I	S	D	D	N	P	A	R	F	L	Q	K	A	M	D	F	P	F	I	C	N	S	F	T	K	F	E	F	N	T	V	F	N	D	Q	R	T	V	F	A	N	F	Y	D	A	M	I	C	V	A	Y	K	F	D	A	A	M	M	A	L	R	T	S	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S				T	T										T		G	G	G	G	G	G	G	S	S						S	S	S	S																														T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	N	D	F	G	F	I	W	L	V	L	S	S	T	V	R	A	Y	A	S	R	A	F	K	K	I	V	T	Y	K	G	G	K	Y	R	K	V	T	F	Q	C	L	K	S	I	A	W	R	A	F	L	A	V	L	K	R	R	T	E	I	Y	K	G	L	I	D	R	I	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T																							T			T	T																						G	G	G	T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
Sequence	R	E	K	L	T	M	K	F	H	D	G	E	V	D	A	S	Y	F	C	K	L	P	E	K	F	R	F	V	K	I	N	R	K	A	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							S		T	T			G	G	G	G	S	S			T	T	T	T	T		B

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PDB structure

FASTA sequence

Hidden Markov model

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