PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zf8A_

Fold library id	PDB Header	Molecule	Title
c2zf8A_	PDB header: structural protein	Chain: A: PDB Molecule: component of sodium-driven polar flagellar motor;	PDBTitle: crystal structure of moty

Links to external resources
Added to library: Tue Mar 16 12:46:51 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V M G K R Y V A T P Q Q S Q W E M V V N T P L E C Q L V H P I P S F G D A V F S S R A N K K I N L D F E L K M R R P M G E T R N V S L I S M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S S S
S S S S
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P P P W R P G E H A D R I T N L K F F K Q F D G Y V G G Q T A W G I L S E L E K G R Y P T F S Y Q D W Q S R D Q R I E V A L S S V L F Q N K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
S S T T
S S T
B
S S S S
B
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y N A F S D C I S N L L K Y S F E D I A F T I L H Y E R Q G D Q L T K A S K K R L S Q I A D Y I R H N Q D I D L V L V A T Y S A S Q S L S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
S S T T S
B S S S S S S S B
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . .

Sequence R R A E S L R D Y F Q S L G L P E D R I Q V Q G Y G R V V I S L G R T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	M	G	K	R	Y	V	A	T	P	Q	Q	S	Q	W	E	M	V	V	N	T	P	L	E	C	Q	L	V	H	P	I	P	S	F	G	D	A	V	F	S	S	R	A	N	K	K	I	N	L	D	F	E	L	K	M	R	R	P	M	G	E	T	R	N	V	S	L	I	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T									S	S	S									S	S	S									S		S	S										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	P	P	W	R	P	G	E	H	A	D	R	I	T	N	L	K	F	F	K	Q	F	D	G	Y	V	G	G	Q	T	A	W	G	I	L	S	E	L	E	K	G	R	Y	P	T	F	S	Y	Q	D	W	Q	S	R	D	Q	R	I	E	V	A	L	S	S	V	L	F	Q	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		S			S	S	T	T												S				S													T							B			S	S	S	S							B				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	N	A	F	S	D	C	I	S	N	L	L	K	Y	S	F	E	D	I	A	F	T	I	L	H	Y	E	R	Q	G	D	Q	L	T	K	A	S	K	K	R	L	S	Q	I	A	D	Y	I	R	H	N	Q	D	I	D	L	V	L	V	A	T	Y	S	A	S	Q	S	L	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S		S		S	S	T	T	S						B	S	S	S	S	S	S	S	B																T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Sequence	R	R	A	E	S	L	R	D	Y	F	Q	S	L	G	L	P	E	D	R	I	Q	V	Q	G	Y	G	R	V	V	I	S	L	G	R	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S			T	T	S