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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3nf9A_

Fold library idPDB HeaderMoleculeTitle
c3nf9A_PDB header: hydrolase/hydrolase inhibitorChain: A: PDB Molecule: integrase;PDBTitle: structural basis for a new mechanism of inhibition of hiv integrase2 identified by fragment screening and structure based design


Added to library: Sat Apr 30 08:58:05 2011
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTV
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Known secondary structure (DSSP)
TTTTTTTTSS

S



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KAACWWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNHKRKGYSAGERI
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Known secondary structure (DSSP) T




SSTGGG
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B


B
 .........
Sequence VDIIATDIQ
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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