Email l.a.kelley@imperial.ac.uk Description P30870 Date Thu Jan 5 11:46:43 GMT 2012 Unique Job ID f5ee813292741547

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3k7dA_ 100.0 100 PDB header:transferase Chain: A: PDB Molecule:glutamate-ammonia-ligase adenylyltransferase; PDBTitle: c-terminal (adenylylation) domain of e.coli glutamine synthetase2 adenylyltransferase 2 c1v4aA_ 100.0 97 PDB header:transferase Chain: A: PDB Molecule:glutamate-ammonia-ligase adenylyltransferase; PDBTitle: structure of the n-terminal domain of escherichia coli2 glutamine synthetase adenylyltransferase 3 d1v4aa2 100.0 97 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:GlnE-like domain 4 d1v4aa1 100.0 97 Fold:Four-helical up-and-down bundle Superfamily:Nucleotidyltransferase substrate binding subunit/domain Family:Glutamine synthase adenylyltransferase GlnE, domain 2 5 d1knya2 95.7 22 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Kanamycin nucleotidyltransferase (KNTase), N-terminal domain 6 c1knyA_ 95.0 22 PDB header:transferase Chain: A: PDB Molecule:kanamycin nucleotidyltransferase; PDBTitle: kanamycin nucleotidyltransferase 7 c2rffA_ 93.7 19 PDB header:transferase Chain: A: PDB Molecule:putative nucleotidyltransferase; PDBTitle: crystal structure of a putative nucleotidyltransferase2 (np_343093.1) from sulfolobus solfataricus at 1.40 a3 resolution 8 d1no5a_ 91.0 26 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 9 d1wota_ 89.1 31 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 10 c3c66B_ 87.3 15 PDB header:transferase Chain: B: PDB Molecule:poly(a) polymerase; PDBTitle: yeast poly(a) polymerase in complex with fip1 residues 80-105 11 c1q78A_ 86.5 14 PDB header:transferase Chain: A: PDB Molecule:poly(a) polymerase alpha; PDBTitle: crystal structure of poly(a) polymerase in complex with 3'-2 datp and magnesium chloride 12 d1ylqa1 85.1 27 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 13 c3jz0B_ 76.8 20 PDB header:transferase/antibiotic Chain: B: PDB Molecule:lincosamide nucleotidyltransferase; PDBTitle: linb complexed with clindamycin and ampcpp 14 c3o7kA_ 69.4 21 PDB header:lyase Chain: A: PDB Molecule:ohcu decarboxylase; PDBTitle: crystal structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline2 decarboxylase from klebsiella pneumoniae 15 d1q79a2 66.9 14 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly(A) polymerase, PAP, N-terminal domain 16 c1kdhA_ 60.8 13 PDB header:transferase/dna Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna 17 d2o70a1 57.8 18 Fold:UraD-like Superfamily:UraD-Like Family:UraD-like 18 d2q66a2 57.2 12 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Poly(A) polymerase, PAP, N-terminal domain 19 c3hvzB_ 55.9 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the tgs domain of the clolep_03100 protein from2 clostridium leptum, northeast structural genomics consortium target3 qlr13a 20 c1sz1A_ 54.5 20 PDB header:transferase/rna Chain: A: PDB Molecule:trna nucleotidyltransferase; PDBTitle: mechanism of cca-adding enzymes specificity revealed by crystal2 structures of ternary complexes 21 d1r89a2 not modelled 49.5 18 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Archaeal tRNA CCA-adding enzyme catalytic domain 22 d2fmpa3 not modelled 47.1 10 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 23 d1d5ya2 not modelled 47.1 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 24 c3r66A_ not modelled 44.0 13 PDB header:viral protein/antiviral protein Chain: A: PDB Molecule:non-structural protein 1; PDBTitle: crystal structure of human isg15 in complex with ns1 n-terminal region2 from influenza virus b, northeast structural genomics consortium3 target ids hx6481, hr2873, and or2 25 d2bcqa3 not modelled 43.9 17 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 26 d2vana2 not modelled 42.0 13 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 27 d1xeqa1 not modelled 39.7 13 Fold:S15/NS1 RNA-binding domain Superfamily:S15/NS1 RNA-binding domain Family:N-terminal, RNA-binding domain of nonstructural protein NS1 28 d1jqra_ not modelled 39.6 33 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 29 c2kmmA_ not modelled 36.4 13 PDB header:hydrolase Chain: A: PDB Molecule:guanosine-3',5'-bis(diphosphate) 3'- PDBTitle: solution nmr structure of the tgs domain of pg1808 from2 porphyromonas gingivalis. northeast structural genomics3 consortium target pgr122a (418-481) 30 d1bl0a2 not modelled 34.8 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 31 d1phna_ not modelled 33.1 16 Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins 32 c2q0dA_ not modelled 30.9 15 PDB header:transferase Chain: A: PDB Molecule:rna uridylyl transferase; PDBTitle: terminal uridylyl transferase 4 from trypanosoma brucei2 with bound atp 33 d1jmsa4 not modelled 29.8 14 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 34 c3ng3A_ not modelled 29.5 25 PDB header:lyase Chain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde 35 d1vi7a1 not modelled 28.1 35 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:YigZ N-terminal domain-like 36 c2dt5A_ not modelled 25.2 28 PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 37 c1nomA_ not modelled 24.6 14 PDB header:nucleotidyltransferase Chain: A: PDB Molecule:dna polymerase beta; PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7), 31-kd domain; soaked in the2 presence of mncl2 (5 millimolar) 38 d2dt5a2 not modelled 23.8 28 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Transcriptional repressor Rex, C-terminal domain 39 d2cvea1 not modelled 23.6 44 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:YigZ N-terminal domain-like 40 c3f2eA_ not modelled 23.3 19 PDB header:viral protein Chain: A: PDB Molecule:sirv coat protein; PDBTitle: crystal structure of yellowstone sirv coat protein c-2 terminus 41 d2b8ta1 not modelled 22.4 15 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Type II thymidine kinase 42 d1o0ya_ not modelled 22.4 22 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 43 c3hiyA_ not modelled 21.8 14 PDB header:transferase Chain: A: PDB Molecule:minor editosome-associated tutase; PDBTitle: minor editosome-associated tutase 1 with bound utp and mg 44 d1cpca_ not modelled 21.4 14 Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins 45 d1qmga2 not modelled 20.6 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 46 c3ngjC_ not modelled 20.4 22 PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica 47 c3nybA_ not modelled 18.2 11 PDB header:transferase/rna binding protein Chain: A: PDB Molecule:poly(a) rna polymerase protein 2; PDBTitle: structure and function of the polymerase core of tramp, a rna2 surveillance complex 48 c2ihmA_ not modelled 18.1 14 PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide 49 c2b8tA_ not modelled 17.9 15 PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine 50 d1pvea_ not modelled 17.2 13 Fold:XPC-binding domain Superfamily:XPC-binding domain Family:XPC-binding domain 51 d1r8ka_ not modelled 16.6 23 Fold:Isocitrate/Isopropylmalate dehydrogenase-like Superfamily:Isocitrate/Isopropylmalate dehydrogenase-like Family:PdxA-like 52 d1sfla_ not modelled 16.5 16 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 53 c8iczA_ not modelled 16.1 11 PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar) 54 c2bcuA_ not modelled 15.7 22 PDB header:transferase, lyase/dna Chain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch 55 c2a4aB_ not modelled 15.5 18 PDB header:lyase Chain: B: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: deoxyribose-phosphate aldolase from p. yoelii 56 c1ug9A_ not modelled 15.3 23 PDB header:hydrolase Chain: A: PDB Molecule:glucodextranase; PDBTitle: crystal structure of glucodextranase from arthrobacter globiformis i42 57 c2xvcA_ not modelled 15.3 38 PDB header:cell cycle Chain: A: PDB Molecule:escrt-iii; PDBTitle: molecular and structural basis of escrt-iii recruitment to2 membranes during archaeal cell division 58 c2jq5A_ not modelled 14.9 17 PDB header:structural genomics Chain: A: PDB Molecule:sec-c motif; PDBTitle: solution structure of rpa3114, a sec-c motif containing2 protein from rhodopseudomonas palustris; northeast3 structural genomics consortium target rpt5 / ontario4 center for structural proteomics target rp3097 59 c1tltB_ not modelled 14.9 22 PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase (virulence factor mvim homolog); PDBTitle: crystal structure of a putative oxidoreductase (virulence factor mvim2 homolog) 60 d1ha7a_ not modelled 14.8 13 Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins 61 d1qt1a_ not modelled 14.6 25 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:Xylose isomerase 62 c2j96B_ not modelled 14.5 13 PDB header:photosynthesis Chain: B: PDB Molecule:phycoerythrocyanin alpha chain; PDBTitle: the e-configuration of alfa-phycoerythrocyanin 63 d1mzha_ not modelled 14.4 28 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 64 c1yybA_ not modelled 13.3 24 PDB header:apoptosis Chain: A: PDB Molecule:programmed cell death protein 5; PDBTitle: solution structure of 1-26 fragment of human programmed2 cell death 5 protein 65 c3l9cA_ not modelled 13.1 31 PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: the crystal structure of smu.777 from streptococcus mutans ua159 66 c3pq1A_ not modelled 13.1 11 PDB header:transferase Chain: A: PDB Molecule:poly(a) rna polymerase; PDBTitle: crystal structure of human mitochondrial poly(a) polymerase (papd1) 67 c2gf5A_ not modelled 13.0 14 PDB header:apoptosis Chain: A: PDB Molecule:fadd protein; PDBTitle: structure of intact fadd (mort1) 68 c2oczA_ not modelled 12.9 15 PDB header:lyase Chain: A: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: the structure of a putative 3-dehydroquinate dehydratase from2 streptococcus pyogenes. 69 c1vh6A_ not modelled 12.8 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:flagellar protein flis; PDBTitle: crystal structure of a flagellar protein 70 d1vh6a_ not modelled 12.8 10 Fold:Four-helical up-and-down bundle Superfamily:Flagellar export chaperone FliS Family:Flagellar export chaperone FliS 71 c3oa3A_ not modelled 12.7 26 PDB header:lyase Chain: A: PDB Molecule:aldolase; PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 coccidioides immitis 72 d1oqya3 not modelled 12.7 17 Fold:XPC-binding domain Superfamily:XPC-binding domain Family:XPC-binding domain 73 c1yveK_ not modelled 12.6 23 PDB header:oxidoreductase Chain: K: PDB Molecule:acetohydroxy acid isomeroreductase; PDBTitle: acetohydroxy acid isomeroreductase complexed with nadph,2 magnesium and inhibitor ipoha (n-hydroxy-n-3 isopropyloxamate) 74 c2g5xA_ not modelled 12.5 3 PDB header:hydrolase Chain: A: PDB Molecule:ribosome-inactivating protein; PDBTitle: crystal structure of lychnin a type 1 ribosome inactivating2 protein (rip) 75 d1sc6a1 not modelled 12.5 22 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain 76 c1wr1B_ not modelled 12.4 22 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 77 c2of5A_ not modelled 12.4 17 PDB header:apoptosis Chain: A: PDB Molecule:death domain-containing protein cradd; PDBTitle: oligomeric death domain complex 78 c1wxpA_ not modelled 12.3 13 PDB header:transport protein Chain: A: PDB Molecule:tho complex subunit 1; PDBTitle: solution structure of the death domain of nuclear matrix2 protein p84 79 d1gqna_ not modelled 12.1 9 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 80 c1f7uA_ not modelled 11.8 19 PDB header:ligase/rna Chain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: crystal structure of the arginyl-trna synthetase complexed with the2 trna(arg) and l-arg 81 d2fi0a1 not modelled 11.8 17 Fold:SP0561-like Superfamily:SP0561-like Family:SP0561-like 82 c3iwfA_ not modelled 11.7 15 PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator rpir family; PDBTitle: the crystal structure of the n-terminal domain of a rpir2 transcriptional regulator from staphylococcus epidermidis to 1.4a 83 c1hlvA_ not modelled 11.7 14 PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna 84 d2f4mb1 not modelled 11.6 13 Fold:XPC-binding domain Superfamily:XPC-binding domain Family:XPC-binding domain 85 d1qm4a2 not modelled 11.6 18 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 86 d1p1xa_ not modelled 11.5 25 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 87 d1hlva2 not modelled 11.4 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding 88 d1qp8a1 not modelled 11.4 22 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain 89 c1x3wB_ not modelled 11.3 24 PDB header:hydrolase Chain: B: PDB Molecule:uv excision repair protein rad23; PDBTitle: structure of a peptide:n-glycanase-rad23 complex 90 d1np3a2 not modelled 11.2 43 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 91 d1kn1a_ not modelled 11.2 5 Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins 92 c2ytuA_ not modelled 11.1 15 PDB header:signaling protein Chain: A: PDB Molecule:friend leukemia integration 1 transcription PDBTitle: solution structure of the sam_pnt-domain of the human2 friend leukemiaintegration 1 transcription factor 93 d1jboa_ not modelled 11.0 17 Fold:Globin-like Superfamily:Globin-like Family:Phycocyanin-like phycobilisome proteins 94 d1mxaa2 not modelled 10.9 24 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 95 d1dxya1 not modelled 10.6 20 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain 96 c2cveA_ not modelled 10.6 75 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1053; PDBTitle: crystal structure of a conserved hypothetical protein tt1547 from2 thermus thermophilus hb8 97 c2vq3B_ not modelled 10.6 15 PDB header:oxidoreductase Chain: B: PDB Molecule:metalloreductase steap3; PDBTitle: crystal structure of the membrane proximal oxidoreductase2 domain of human steap3, the dominant ferric reductase of3 the erythroid transferrin cycle 98 c3d19E_ not modelled 10.4 16 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:conserved metalloprotein; PDBTitle: crystal structure of a conserved metalloprotein from bacillus cereus 99 c3l2iB_ not modelled 10.4 25 PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2.