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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3c66B_

Fold library idPDB HeaderMoleculeTitle
c3c66B_PDB header: transferaseChain: B: PDB Molecule: poly(a) polymerase;PDBTitle: yeast poly(a) polymerase in complex with fip1 residues 80-2 105


Added to library: Tue Mar 16 12:46:43 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNM
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Known secondary structure (DSSP)

GGG
TT

S





TT
S

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLRERKELDEIAPVPDAFVP
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Known secondary structure (DSSP)
TB
T


SS


TT

TTT
SSTTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALR
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Known secondary structure (DSSP) TT
SSS
B
TT

S

GGGGTT

TT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence AIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPL
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Known secondary structure (DSSP) TT


GGGTS


TT

S
TTS
SS




TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKN
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Known secondary structure (DSSP) GGGS

TTT
T
SS

SSSS

BTTTT

TTSS
T


 .........360.........370.........380.........390.........400.........410.........420
Sequence DFFFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYE
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Known secondary structure (DSSP)

S
TTTSTT
SS


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence MIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVDIHIPCTEFVNLC
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Known secondary structure (DSSP) TT
TTTGGGGGGS
B

TTTTTSSS



SSS




S
 .........500.........510.........520.........
Sequence RSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSK
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Known secondary structure (DSSP)

SSS



TTTGGG

GGGS
SS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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