PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ngjC_

Fold library id	PDB Header	Molecule	Title
c3ngjC_	PDB header: lyase	Chain: C: PDB Molecule: deoxyribose-phosphate aldolase;	PDBTitle: crystal structure of a putative deoxyribose-phosphate aldolase from2 entamoeba histolytica

Links to external resources
Added to library: Sun Aug 29 02:46:42 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P G S M D K A T L A K Y I D H T L L K A D A T E E Q I R K L C S E A A E Y K F A S V C V N P T W V P L C A E L L K G T G V K V C T V I G F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T
S
G G G T T T S S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L G A T P S E V K A Y E T K V A V E Q G A E E V D M V I N I G M V K A K K Y D D V E K D V K A V V D A S G K A L T K V I I E C C Y L T N E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T
S
T T
T T S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K V E V C K R C V A A G A E Y V K T S T G F G T H G A T P E D V K L M K D T V G D K A L V K A A G G I R T F D D A M K M I N N G A S R I G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S S S
T T S S S S
S T T

. . . . . . . . . 220 .

Sequence S A G I A I L N G I H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	G	S	M	D	K	A	T	L	A	K	Y	I	D	H	T	L	L	K	A	D	A	T	E	E	Q	I	R	K	L	C	S	E	A	A	E	Y	K	F	A	S	V	C	V	N	P	T	W	V	P	L	C	A	E	L	L	K	G	T	G	V	K	V	C	T	V	I	G	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T								T	T																	T		S						G	G	G								T	T	T	S	S								S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	A	T	P	S	E	V	K	A	Y	E	T	K	V	A	V	E	Q	G	A	E	E	V	D	M	V	I	N	I	G	M	V	K	A	K	K	Y	D	D	V	E	K	D	V	K	A	V	V	D	A	S	G	K	A	L	T	K	V	I	I	E	C	C	Y	L	T	N	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S															T	T		S													T	T																	T	T	S								G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	E	V	C	K	R	C	V	A	A	G	A	E	Y	V	K	T	S	T	G	F	G	T	H	G	A	T	P	E	D	V	K	L	M	K	D	T	V	G	D	K	A	L	V	K	A	A	G	G	I	R	T	F	D	D	A	M	K	M	I	N	N	G	A	S	R	I	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T		S							S	S	S	S																T	T	S	S						S	S			S										T	T
	.	.	.	.	.	.	.	.	.	220	.
Sequence	S	A	G	I	A	I	L	N	G	I	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								T