PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2oczA_

Fold library id	PDB Header	Molecule	Title
c2oczA_	PDB header: lyase	Chain: A: PDB Molecule: 3-dehydroquinate dehydratase;	PDBTitle: the structure of a putative 3-dehydroquinate dehydratase2 from streptococcus pyogenes.

Links to external resources
Added to library: Tue Mar 16 12:54:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X R I V A P V X P R H F D E A Q A I D I S K Y E D V N L I E W R A D F L P K D E I V A V A P A I F E K F A G K E I I F T L R T V Q E G G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
G G G G T T
S G G G S
G G G T T T S
B G G G T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I T L S S Q E Y V D I I K E I N A I Y N P D Y I D F E Y F T H K S V F Q E X L D F P N L I L S Y H N F E E T P E N L X E A F S E X T K L A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
S T T T T G G G G G G G T T
S S S S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R V V K I A V X P Q S E Q D V L D L X N Y T R G F K T L N P E Q E F A T I S X G K L G R L S R F A G D V I G S S W T Y V S L G Q V T L N D X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T
G G G G G
T
B
B

. . . . . . . .

Sequence K R I I E V L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	R	I	V	A	P	V	X	P	R	H	F	D	E	A	Q	A	I	D	I	S	K	Y	E	D	V	N	L	I	E	W	R	A	D	F	L	P	K	D	E	I	V	A	V	A	P	A	I	F	E	K	F	A	G	K	E	I	I	F	T	L	R	T	V	Q	E	G	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S						T			G	G	G	G	T	T		S						G	G	G	S		G	G	G												T	T	T	S								B	G	G	G	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	T	L	S	S	Q	E	Y	V	D	I	I	K	E	I	N	A	I	Y	N	P	D	Y	I	D	F	E	Y	F	T	H	K	S	V	F	Q	E	X	L	D	F	P	N	L	I	L	S	Y	H	N	F	E	E	T	P	E	N	L	X	E	A	F	S	E	X	T	K	L	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B																					S						T	T	T	T	G	G	G	G	G	G	G	T	T		S	S								S	S				T	T											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	V	V	K	I	A	V	X	P	Q	S	E	Q	D	V	L	D	L	X	N	Y	T	R	G	F	K	T	L	N	P	E	Q	E	F	A	T	I	S	X	G	K	L	G	R	L	S	R	F	A	G	D	V	I	G	S	S	W	T	Y	V	S	L	G	Q	V	T	L	N	D	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S	S																			T	T													G	G	G	G	G						T							B					B
	.	.	.	.	.	.	.	.
Sequence	K	R	I	I	E	V	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)