Fold library entry viewer: c1q78A_

Added to library: Tue Mar 16 12:03:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	Y	G	I	T	S	P	I	S	L	A	A	P	K	E	T	D	L	L	T	Q	K	L	V	E	T	L	K	P	F	G	V	F	E	E	E	E	E	L	Q	R	R	I	L	I	L	G	K	L	N	N	L	V	K	E	W	I	R	E	I	S	E	S	K	N	L	P	Q	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S			S							T	T												G	G	G	T		S																															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	E	N	V	G	G	K	I	F	T	F	G	S	Y	R	L	G	V	H	T	K	G	A	D	I	D	A	L	C	V	A	P	R	H	V	D	R	S	D	F	F	T	S	F	Y	D	K	L	K	L	Q	E	E	V	K	D	L	R	A	V	E	E	A	F	V	P	V	I	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		B												T				T	T											T	T	S						T	T								T		T	T								T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	F	D	G	I	E	I	D	I	L	F	A	R	L	A	L	Q	T	I	P	E	D	L	D	L	R	D	D	S	L	L	K	N	L	D	I	R	I	R	S	L	N	G	C	R	V	T	D	E	I	L	H	L	V	P	N	I	D	N	F	R	L	T	L	R	A	I	K	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											S		S	S	B		T	T			T	T		G	G	G	G	T	T																		T	T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	K	R	H	N	I	Y	S	N	I	L	G	F	L	G	G	V	S	W	A	M	L	V	A	R	T	C	Q	L	Y	P	N	A	I	A	S	T	L	V	H	K	F	F	L	V	F	S	K	W	E	W	P	N	P	V	L	L	K	Q	P	E	E	C	N	L	N	L	P	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		B		T	T	T	T	S	B															T	S	T	T															T	T			T	T	S		B		S	S						S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	P	R	V	N	P	S	D	R	Y	H	L	M	P	I	I	T	P	A	Y	P	Q	Q	N	S	T	Y	N	V	S	V	S	T	R	M	V	M	V	E	E	F	K	Q	G	L	A	I	T	D	E	I	L	L	S	K	A	E	W	S	K	L	F	E	A	P	N	F	F	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T		G	G	G	G	G		S	S		B	B		S	S	S	S			B	T	T	T	T																									T	T	S	S		G	G	G	G	G					G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	K	H	Y	I	V	L	L	A	S	A	P	T	E	K	Q	R	L	E	W	V	G	L	V	E	S	K	I	R	I	L	V	G	S	L	E	K	N	E	F	I	T	L	A	H	V	N	P	Q	S	F	P	A	P	K	E	N	P	D	K	E	E	F	R	T	M	W	V	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S										S	S																									S	T	T								S								S		S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Sequence	L	V	F	K	D	L	T	Y	D	I	Q	S	F	T	D	T	V	Y	R	Q	A	I	N	S	K	M	F	E	V	D	M	K	I	A	A	M	H	V	K	R	K	Q	L	H	Q	L	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T				T	T														T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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