PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2g5xA_

Fold library id	PDB Header	Molecule	Title
c2g5xA_	PDB header: hydrolase	Chain: A: PDB Molecule: ribosome-inactivating protein;	PDBTitle: crystal structure of lychnin a type 1 ribosome inactivating2 protein (rip)

Links to external resources
Added to library: Tue Mar 16 12:57:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R P S W T V D S D S A K Y S S F L D S L R E E F G R G T P K V C N I P V T K K A N N D K F V L V N L V L P F N R N T I T L A F R A S D A Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
B T T B
B
T T G G G
T T T
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V G F Q D R D S K T N K L R A N F F S D E Y R A L S G K Y K S I F T D A E V L A P A L P C A S T Y T D L Q N K A G V S R E K L S L G V S S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T T G G G S T T
S S
S S T S
T T T
B S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q T A F T A V Y G K V F T G K N V A K F A L I S I Q M V A E A A R F K Y I E D Q V I N R G M Y S S F E A G A R I T L L E N N W S K I S E Q Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T B S S S S
B
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . .

Sequence H K S C K L G G G Q F T E E E M K L G L L L Y N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S S
T T T T
B S S B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	P	S	W	T	V	D	S	D	S	A	K	Y	S	S	F	L	D	S	L	R	E	E	F	G	R	G	T	P	K	V	C	N	I	P	V	T	K	K	A	N	N	D	K	F	V	L	V	N	L	V	L	P	F	N	R	N	T	I	T	L	A	F	R	A	S	D	A	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																		T	T	S			B	T	T	B		B			T	T	G	G	G										T	T	T										T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	G	F	Q	D	R	D	S	K	T	N	K	L	R	A	N	F	F	S	D	E	Y	R	A	L	S	G	K	Y	K	S	I	F	T	D	A	E	V	L	A	P	A	L	P	C	A	S	T	Y	T	D	L	Q	N	K	A	G	V	S	R	E	K	L	S	L	G	V	S	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T									T	T	T					G	G	G					S	T	T									S	S		S	S									T	S		T	T	T			B	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	T	A	F	T	A	V	Y	G	K	V	F	T	G	K	N	V	A	K	F	A	L	I	S	I	Q	M	V	A	E	A	A	R	F	K	Y	I	E	D	Q	V	I	N	R	G	M	Y	S	S	F	E	A	G	A	R	I	T	L	L	E	N	N	W	S	K	I	S	E	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	S																		T						B											S	S	S	S		B												T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Sequence	H	K	S	C	K	L	G	G	G	Q	F	T	E	E	E	M	K	L	G	L	L	L	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S					S	S	S		T	T	T	T		B	S	S	B