Email l.a.kelley@imperial.ac.uk Description P31119 Date Thu Jan 5 11:47:06 GMT 2012 Unique Job ID e7fb12ac9a0e9d00

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2vsqA_ 100.0 16 PDB header:ligase Chain: A: PDB Molecule:surfactin synthetase subunit 3; PDBTitle: structure of surfactin a synthetase c (srfa-c), a2 nonribosomal peptide synthetase termination module 2 d1pg4a_ 100.0 18 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 3 d1ry2a_ 100.0 19 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 4 c3tsyA_ 100.0 19 PDB header:ligase, transferase Chain: A: PDB Molecule:fusion protein 4-coumarate--coa ligase 1, resveratrol PDBTitle: 4-coumaroyl-coa ligase::stilbene synthase fusion protein 5 d3cw9a1 100.0 19 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 6 d1mdba_ 100.0 19 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 7 c3e7wA_ 100.0 16 PDB header:ligase Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1; PDBTitle: crystal structure of dlta: implications for the reaction2 mechanism of non-ribosomal peptide synthetase (nrps)3 adenylation domains 8 c3etcB_ 100.0 18 PDB header:ligase Chain: B: PDB Molecule:amp-binding protein; PDBTitle: 2.1 a structure of acyl-adenylate synthetase from methanosarcina2 acetivorans containing a link between lys256 and cys298 9 c3ni2A_ 100.0 22 PDB header:ligase Chain: A: PDB Molecule:4-coumarate:coa ligase; PDBTitle: crystal structures and enzymatic mechanisms of a populus tomentosa 4-2 coumarate:coa ligase 10 c3gqwB_ 100.0 20 PDB header:ligase Chain: B: PDB Molecule:fatty acid amp ligase; PDBTitle: crystal structure of a fatty acid amp ligase from e. coli with an acyl2 adenylate product bound 11 c3kxwA_ 100.0 16 PDB header:ligase Chain: A: PDB Molecule:saframycin mx1 synthetase b; PDBTitle: the crystal structure of fatty acid amp ligase from legionella2 pneumophila 12 c3iteB_ 100.0 20 PDB header:ligase Chain: B: PDB Molecule:sidn siderophore synthetase; PDBTitle: the third adenylation domain of the fungal sidn non-2 ribosomal peptide synthetase 13 c3eynB_ 100.0 18 PDB header:ligase Chain: B: PDB Molecule:acyl-coenzyme a synthetase acsm2a; PDBTitle: crystal structure of human acyl-coa synthetase medium-chain2 family member 2a (l64p mutation) in a complex with coa 14 c2d1tA_ 100.0 20 PDB header:oxidoreductase Chain: A: PDB Molecule:luciferin 4-monooxygenase; PDBTitle: crystal structure of the thermostable japanese firefly2 luciferase red-color emission s286n mutant complexed with3 high-energy intermediate analogue 15 d1amua_ 100.0 18 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 16 c2v7bB_ 100.0 20 PDB header:ligase Chain: B: PDB Molecule:benzoate-coenzyme a ligase; PDBTitle: crystal structures of a benzoate coa ligase from2 burkholderia xenovorans lb400 17 c1amuB_ 100.0 16 PDB header:peptide synthetase Chain: B: PDB Molecule:gramicidin synthetase 1; PDBTitle: phenylalanine activating domain of gramicidin synthetase 12 in a complex with amp and phenylalanine 18 d1v25a_ 100.0 22 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 19 c3nyrA_ 100.0 22 PDB header:ligase Chain: A: PDB Molecule:malonyl-coa ligase; PDBTitle: malonyl-coa ligase ternary product complex with malonyl-coa and amp2 bound 20 c3iplB_ 100.0 21 PDB header:ligase Chain: B: PDB Molecule:2-succinylbenzoate--coa ligase; PDBTitle: crystal structure of o-succinylbenzoic acid-coa ligase from2 staphylococcus aureus subsp. aureus mu50 21 d1lcia_ not modelled 100.0 18 Fold:Acetyl-CoA synthetase-like Superfamily:Acetyl-CoA synthetase-like Family:Acetyl-CoA synthetase-like 22 c3g7sA_ not modelled 100.0 21 PDB header:ligase Chain: A: PDB Molecule:long-chain-fatty-acid--coa ligase (fadd-1); PDBTitle: crystal structure of a long-chain-fatty-acid-coa ligase2 (fadd1) from archaeoglobus fulgidus 23 c3dhvA_ not modelled 100.0 15 PDB header:ligase Chain: A: PDB Molecule:d-alanine-poly(phosphoribitol) ligase; PDBTitle: crystal structure of dlta protein in complex with d-alanine2 adenylate 24 c3l8cA_ not modelled 100.0 16 PDB header:ligase Chain: A: PDB Molecule:d-alanine--poly(phosphoribitol) ligase subunit 1; PDBTitle: structure of probable d-alanine--poly(phosphoribitol) ligase2 subunit-1 from streptococcus pyogenes 25 c3o82B_ not modelled 100.0 16 PDB header:ligase Chain: B: PDB Molecule:peptide arylation enzyme; PDBTitle: structure of base n-terminal domain from acinetobacter baumannii bound2 to 5'-o-[n-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine 26 c3o82A_ not modelled 100.0 16 PDB header:ligase Chain: A: PDB Molecule:peptide arylation enzyme; PDBTitle: structure of base n-terminal domain from acinetobacter baumannii bound2 to 5'-o-[n-(2,3-dihydroxybenzoyl)sulfamoyl] adenosine 27 c3ivrA_ not modelled 100.0 17 PDB header:ligase Chain: A: PDB Molecule:putative long-chain-fatty-acid coa ligase; PDBTitle: crystal structure of putative long-chain-fatty-acid coa ligase from2 rhodopseudomonas palustris cga009 28 c3e53A_ not modelled 100.0 22 PDB header:ligase Chain: A: PDB Molecule:fatty-acid-coa ligase fadd28; PDBTitle: crystal structure of n-terminal domain of a fatty acyl amp2 ligase faal28 from mycobacterium tuberculosis 29 c2y4oA_ not modelled 100.0 14 PDB header:ligase Chain: A: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: crystal structure of paak2 in complex with phenylacetyl adenylate 30 c2y27B_ not modelled 100.0 15 PDB header:ligase Chain: B: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: crystal structure of paak1 in complex with atp from2 burkholderia cenocepacia 31 c3qovD_ not modelled 100.0 13 PDB header:ligase Chain: D: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: crystal structure of a hypothetical acyl-coa ligase (bt_0428) from2 bacteroides thetaiotaomicron vpi-5482 at 2.20 a resolution 32 c3hguB_ not modelled 100.0 15 PDB header:biosynthetic protein Chain: B: PDB Molecule:ehpf; PDBTitle: structure of phenazine antibiotic biosynthesis protein 33 c3laxA_ not modelled 99.4 12 PDB header:ligase Chain: A: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: the crystal structure of a domain of phenylacetate-coenzyme2 a ligase from bacteroides vulgatus atcc 8482 34 d1iuqa_ 98.4 14 Fold:Glycerol-3-phosphate (1)-acyltransferase Superfamily:Glycerol-3-phosphate (1)-acyltransferase Family:Glycerol-3-phosphate (1)-acyltransferase 35 d2z67a1 not modelled 69.4 16 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:SepSecS-like 36 c3ewbX_ not modelled 61.0 10 PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes 37 d1nvma2 not modelled 43.9 10 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:HMGL-like 38 d1ky8a_ not modelled 43.2 15 Fold:ALDH-like Superfamily:ALDH-like Family:ALDH-like 39 c1nvmG_ not modelled 39.5 10 PDB header:lyase/oxidoreductase Chain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate 40 d3bc8a1 not modelled 38.8 13 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:SepSecS-like 41 c3eegB_ not modelled 36.5 12 PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of a 2-isopropylmalate synthase from2 cytophaga hutchinsonii 42 c2i2xD_ not modelled 36.4 13 PDB header:transferase Chain: D: PDB Molecule:methyltransferase 1; PDBTitle: crystal structure of methanol:cobalamin methyltransferase complex2 mtabc from methanosarcina barkeri 43 c3bcxA_ not modelled 34.6 8 PDB header:transferase Chain: A: PDB Molecule:cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3- PDBTitle: e1 dehydrase 44 c2ov3A_ not modelled 34.5 15 PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein component of an abc PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound 45 c2ec5B_ not modelled 33.8 19 PDB header:toxin Chain: B: PDB Molecule:dermonecrotic toxin; PDBTitle: crystal structures reveal a thiol-protease like catalytic triad in the2 c-terminal region of pasteurella multocida toxin 46 c2o1eB_ not modelled 33.6 18 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:ycdh; PDBTitle: crystal structure of the metal-dependent lipoprotein ycdh2 from bacillus subtilis, northeast structural genomics3 target sr583 47 c1bmtB_ not modelled 33.1 7 PDB header:methyltransferase Chain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase 48 d1ja1a1 not modelled 30.9 13 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:NADPH-cytochrome p450 reductase FAD-binding domain-like 49 d1hrua_ not modelled 30.5 21 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 50 c3ezxA_ not modelled 30.5 7 PDB header:transferase Chain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein 51 c1ydnA_ not modelled 28.8 9 PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. 52 d1f06a2 not modelled 28.3 14 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:Dihydrodipicolinate reductase-like 53 d2trcp_ not modelled 26.8 50 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Phosducin 54 d1f20a1 not modelled 26.1 11 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:NADPH-cytochrome p450 reductase FAD-binding domain-like 55 c2cw6B_ not modelled 25.7 10 PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria 56 c2ps3A_ not modelled 24.4 9 PDB header:metal transport Chain: A: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: structure and metal binding properties of znua, a2 periplasmic zinc transporter from escherichia coli 57 d1pq4a_ not modelled 23.2 18 Fold:Chelatase-like Superfamily:"Helical backbone" metal receptor Family:TroA-like 58 d1ddga1 not modelled 21.7 13 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:NADPH-cytochrome p450 reductase FAD-binding domain-like 59 d3bula2 not modelled 21.1 7 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 60 d2ayia1 not modelled 20.8 10 Fold:Thermophilic metalloprotease-like Superfamily:Thermophilic metalloprotease-like Family:Thermophilic metalloprotease (M29) 61 c2dkjB_ not modelled 20.4 9 PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase 62 d1jcua_ not modelled 19.5 25 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:YrdC-like 63 c3bleA_ not modelled 18.7 12 PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate 64 c2kkhA_ not modelled 18.5 6 PDB header:metal transport Chain: A: PDB Molecule:putative heavy metal transporter; PDBTitle: structure of the zinc binding domain of the atpase hma4 65 c2ga7A_ not modelled 18.3 8 PDB header:hydrolase Chain: A: PDB Molecule:copper-transporting atpase 1; PDBTitle: solution structure of the copper(i) form of the third metal-2 binding domain of atp7a protein (menkes disease protein) 66 c2ywiA_ not modelled 18.3 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus 67 c2jg7G_ not modelled 18.1 8 PDB header:oxidoreductase Chain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity 68 d1z7wa1 not modelled 17.9 13 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes 69 c3ivuB_ not modelled 17.8 13 PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og 70 c1k98A_ not modelled 17.4 9 PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment 71 c1l9xA_ not modelled 17.1 3 PDB header:hydrolase Chain: A: PDB Molecule:gamma-glutamyl hydrolase; PDBTitle: structure of gamma-glutamyl hydrolase 72 d1l9xa_ not modelled 17.1 3 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 73 c2zy3A_ not modelled 17.0 10 PDB header:lyase Chain: A: PDB Molecule:l-aspartate beta-decarboxylase; PDBTitle: dodecameric l-aspartate beta-decarboxylase 74 c3hjtB_ not modelled 16.8 20 PDB header:cell adhesion, transport protein Chain: B: PDB Molecule:lmb; PDBTitle: structure of laminin binding protein (lmb) of streptococcus2 agalactiae a bifunctional protein with adhesin and metal3 transporting activity 75 c3cx3A_ not modelled 16.5 16 PDB header:metal binding protein Chain: A: PDB Molecule:lipoprotein; PDBTitle: crystal structure analysis of the streptococcus pneumoniae2 adcaii protein 76 c3eqnB_ not modelled 16.4 28 PDB header:hydrolase Chain: B: PDB Molecule:glucan 1,3-beta-glucosidase; PDBTitle: crystal structure of beta-1,3-glucanase from phanerochaete2 chrysosporium (lam55a) 77 d2ewca1 not modelled 15.9 6 Fold:Bacillus chorismate mutase-like Superfamily:YjgF-like Family:YjgF/L-PSP 78 d1cpza_ not modelled 15.9 21 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 79 d1h80a_ not modelled 15.0 38 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:iota-carrageenase 80 d1dfoa_ not modelled 14.9 10 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like 81 c3gjzB_ not modelled 14.6 18 PDB header:immune system Chain: B: PDB Molecule:microcin immunity protein mccf; PDBTitle: crystal structure of microcin immunity protein mccf from bacillus2 anthracis str. ames 82 c3i7tA_ not modelled 14.5 15 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of rv2704, a member of highly conserved2 yjgf/yer057c/uk114 family, from mycobacterium tuberculosis 83 c2ogwB_ not modelled 14.4 10 PDB header:transport protein Chain: B: PDB Molecule:high-affinity zinc uptake system protein znua PDBTitle: structure of abc type zinc transporter from e. coli 84 d1a0rp_ not modelled 14.2 50 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Phosducin 85 c2e11B_ not modelled 14.2 18 PDB header:hydrolase Chain: B: PDB Molecule:hydrolase; PDBTitle: the crystal structure of xc1258 from xanthomonas campestris: a cn-2 hydrolase superfamily protein with an arsenic adduct in the active3 site 86 c2iyjA_ not modelled 14.0 22 PDB header:isomerase Chain: A: PDB Molecule:thiol disulfide interchange protein dsbc; PDBTitle: crystal structure of the n-terminal dimer domain of e.coli2 dsbc 87 d1vjoa_ not modelled 13.6 7 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 88 c1sfeA_ not modelled 13.6 17 PDB header:dna-binding protein Chain: A: PDB Molecule:ada o6-methylguanine-dna methyltransferase; PDBTitle: ada o6-methylguanine-dna methyltransferase from escherichia coli 89 c3nnkC_ not modelled 13.6 9 PDB header:transferase Chain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway 90 c3mfqB_ not modelled 13.4 13 PDB header:metal binding protein Chain: B: PDB Molecule:high-affinity zinc uptake system protein znua; PDBTitle: a glance into the metal binding specificity of troa: where elaborate2 behaviors occur in the active center 91 c3jurA_ not modelled 13.1 28 PDB header:hydrolase Chain: A: PDB Molecule:exo-poly-alpha-d-galacturonosidase; PDBTitle: the crystal structure of a hyperthermoactive exopolygalacturonase from2 thermotoga maritima 92 d2ch1a1 not modelled 13.0 15 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 93 c3b46B_ not modelled 13.0 18 PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae 94 d1kola2 not modelled 12.9 8 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 95 c2l69A_ not modelled 12.3 16 PDB header:de novo protein Chain: A: PDB Molecule:rossmann 2x3 fold protein; PDBTitle: solution nmr structure of de novo designed protein, p-loop ntpase2 fold, northeast structural genomics consortium target or28 96 c3hkxA_ not modelled 12.0 16 PDB header:hydrolase Chain: A: PDB Molecule:amidase; PDBTitle: crystal structure analysis of an amidase from nesterenkonia sp. 97 c3kjjL_ not modelled 12.0 11 PDB header:unknown function Chain: L: PDB Molecule:nmb1025 protein; PDBTitle: crystal structure of nmb1025, a member of yjgf protein family, from2 neisseria meningitidis (hexagonal crystal form) 98 d1li4a2 not modelled 11.6 17 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:S-adenosylhomocystein hydrolase 99 c3d64A_ not modelled 11.5 19 PDB header:hydrolase Chain: A: PDB Molecule:adenosylhomocysteinase; PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from2 burkholderia pseudomallei