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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2cw6B_

Fold library idPDB HeaderMoleculeTitle
c2cw6B_PDB header: lyaseChain: B: PDB Molecule: hydroxymethylglutaryl-coa lyase, mitochondrial;PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria


Added to library: Tue Mar 16 13:59:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQK
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Known secondary structure (DSSP)


SB

TTTT
SS


TT
S




TTT
GGGTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence FPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY
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Known secondary structure (DSSP)
TT
B



STT
SS
TSS
TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDT
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Known secondary structure (DSSP) STT
BTTTBS

TT
STT



S
GGGB
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence YGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFIC
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Known secondary structure (DSSP) TS
TT

BTTS



TTSSS


B
BTT
B



 .........290......
Sequence QALNRKTSSKVAQATC
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Known secondary structure (DSSP) T






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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