Fold library entry viewer: c1k98A_

Added to library: Tue Mar 16 12:38:06 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	A	E	W	R	S	W	E	V	N	K	R	L	E	Y	S	L	V	K	G	I	T	E	F	I	E	Q	D	T	E	E	A	R	Q	Q	A	T	R	P	I	E	V	I	E	G	P	L	M	D	G	M	N	V	V	G	D	L	F	G	E	G	K	M	F	L	P	Q	V	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	G	G	G	S													T			S	S											T	S	S	S	T	T					T																T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	A	R	V	M	K	Q	A	V	A	Y	L	E	P	F	I	E	A	S	K	E	Q	G	K	T	N	G	K	M	V	I	A	T	V	K	G	D	V	G	D	I	G	K	N	I	V	G	V	V	L	Q	C	N	N	Y	E	I	V	D	L	G	V	M	V	P	A	E	K	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S						S	S	S	S					S									S	S																T	T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	T	A	K	E	V	N	A	D	L	I	G	L	S	G	L	I	T	P	S	L	D	E	M	V	N	V	A	K	E	M	E	R	Q	G	F	T	I	P	L	L	I	G	G	A	T	T	S	K	A	H	T	A	V	K	I	E	Q	N	Y	S	G	P	T	V	Y	V	Q	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		S								S																	T	T			S							S	S										T	G	G	G		S	S						S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	R	T	V	G	V	V	A	A	L	L	S	D	T	Q	R	D	D	F	V	A	R	T	R	K	E	Y	E	T	V	R	I	Q	H	G	R	K	K	P	R	T	P	P	V	T	L	E	A	A	R	D	N	D	F	A	F	D	W	Q	A	Y	T	P	P	V	A	H	R	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		T	T																				S	S	S		T	T				B									T						T	T	T							S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	Q	E	V	E	A	S	I	E	T	L	R	N	Y	I	D	W	T	P	F	F	M	T	W	S	L	A	G	K	Y	P	R	I	L	E	D	E	V	V	G	V	E	A	Q	R	L	F	K	D	A	N	D	M	L	D	K	L	S	A	E	K	T	L	N	P	R	G	V	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T										T	T			S		T	T	G	G	G	G		S	S	S																						T		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	F	P	A	N	R	V	G	D	D	I	E	I	Y	R	D	E	T	R	T	H	V	I	N	V	S	H	H	L	R	Q	Q	T	E	K	T	G	F	A	N	Y	C	L	A	D	F	V	A	P	K	L	S	G	K	A	D	Y	I	G	A	F	A	V	T	G	G	L	E	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T						S	S	T	T															B			S	S	S					G	G	G	G	S		B	S	T	T													S		S	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	L	A	D	A	F	E	A	Q	H	D	D	Y	N	K	I	M	V	K	A	L	A	D	R	L	A	E	A	F	A	E	Y	L	H	E	R	V	R	K	V	Y	W	G	Y	A	P	N	E	N	L	S	N	E	E	L	I	R	E	N	Y	Q	G	I	R	P	A	P	G	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T																														T	T	S		S		S	S									T	T	T		S	S	S	B				T	T	S	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	C	P	E	H	T	E	K	A	T	I	W	E	L	L	E	V	E	K	H	T	G	M	K	L	T	E	S	F	A	M	W	P	G	A	S	V	S	G	W	Y	F	S	H	P	D	S	K	Y	Y	A	V	A	Q	I	Q	R	D	Q	V	E	D	Y	A	R	R	K	G	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S			T	T										T											T	T	S				S	S	S							B			T	T									B													T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Sequence	V	T	E	V	E	R	W	L	A	P	N	L	G	Y	D	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	B		S

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PDB structure

FASTA sequence

Hidden Markov model

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