Fold library entry viewer: c2ec5B_

Added to library: Tue Mar 16 12:13:54 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	G	G	S	P	Y	S	P	F	R	I	G	L	E	G	V	W	T	P	E	V	L	K	A	R	A	S	V	I	G	K	P	I	G	E	S	Y	K	R	I	L	A	K	L	Q	R	I	H	N	S	N	I	L	D	E	R	Q	G	L	M	H	E	L	M	E	L	I	D	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S		T	T					T	T	S										S			T	T																						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	S	Q	P	S	S	E	R	L	N	A	F	R	E	L	R	T	Q	L	E	K	A	L	Y	L	P	E	M	E	A	L	K	K	Q	I	L	Q	I	P	N	K	G	S	G	A	A	R	F	L	L	R	T	A	M	N	E	M	A	G	K	T	S	E	S	T	A	D	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		T	T																S		G	G	G									T	S	S		T	T	S	S														T	T	S	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	F	A	L	Q	D	T	V	I	S	A	P	F	R	G	Y	A	G	A	I	P	E	A	I	D	F	P	V	K	Y	V	I	E	D	I	S	V	F	D	K	I	Q	T	N	Y	W	E	L	P	A	Y	E	S	W	N	E	G	S	N	S	A	L	L	P	G	L	L	R	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	S				S	B		S				T	T			S							S		G	G	G	G	G	G	S	S			G	G	G	S	T	T	S	S	S	S			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	S	K	G	M	L	S	K	C	R	I	I	E	N	S	L	Y	I	G	H	S	Y	E	E	M	F	Y	S	I	S	P	Y	S	N	Q	V	G	G	P	Y	E	L	Y	P	F	T	F	F	S	M	L	Q	E	V	Q	G	D	L	G	F	E	Q	A	F	A	T	R	N	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T			T	T					T	T						S										S	S	S	S		S	S			S	S																T	T	S							B	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	T	L	V	S	D	R	L	S	L	M	E	N	T	M	L	L	T	E	S	F	D	Y	T	P	W	D	A	I	Y	G	D	I	N	Y	D	E	Q	F	A	A	M	S	I	N	E	R	I	E	K	C	M	N	T	Y	R	G	V	A	F	Q	N	S	S	K	S	I	D	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T								T	T	T			T	T	T	T	T	S			T	T	S	S	S	S							T	T	S							S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	N	N	L	T	T	F	I	D	N	G	L	T	E	I	A	I	S	D	L	P	Y	D	I	V	Q	Q	E	I	S	Q	F	L	Q	G	S	N	E	W	K	T	L	D	A	M	L	F	N	L	D	K	G	D	I	N	G	A	F	R	K	L	L	Q	S	A	K	D	N	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S					T	T	T																								T															T	T	S		S	S		S											T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	F	R	A	I	G	H	S	D	N	S	V	P	P	F	N	N	P	Y	K	S	L	Y	Y	K	G	N	I	I	A	E	A	I	E	K	L	D	R	E	G	Q	K	F	V	V	F	A	D	S	S	L	L	N	S	T	P	G	T	G	R	P	M	P	G	L	V	Q	Y	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		S	S																						S	S			T	T													S				B	S	S	S										T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	P	A	T	V	V	D	S	D	G	A	W	Q	F	L	P	D	V	A	S	S	R	V	P	I	E	V	T	E	L	E	N	W	Q	V	L	T	P	P	Q	G	K	I	L	G	L	K	Q	F	K	L	T	A	G	F	P	T	E	Q	S	R	L	P	L	L	E	N	S	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S										T	T	T	S	S	B							T	T				S	S		S	S	S					S	S	B				S	S	S								T	T	S				S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	D	L	R	E	E	L	M	Q	K	I	D	A	I	K	N	D	V	K	M	N	S	L	V	S	M	E	A	G	S	C	D	S	V	S	P	K	V	A	A	R	L	K	D	M	G	L	E	A	G	M	G	A	S	I	T	W	W	R	R	E	G	G	M	E	F	S	H	Q	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S														S						T	T				S	T	T	T															T	T			B													S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	T	T	A	S	F	K	F	A	G	K	E	F	A	V	D	A	S	H	L	Q	F	V	H	D	Q	L	D	T	T	I	L	I	L	P	V	D	D	W	A	L	E	I	A	Q	R	N	R	A	I	N	P	F	V	E	Y	V	S	K	T	G	N	M	L	A	L	F	M	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S						T	T	G	G	G	S				S	S	S		S	S																T	T								S	S									T
	.	.	.	.	.	.	.	.	.	710	.
Sequence	L	F	T	K	P	R	L	T	R	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S					S

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PDB structure

FASTA sequence

Hidden Markov model

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