Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP0A7E5
DateThu Jan 5 11:05:30 GMT 2012
Unique Job IDc019cfb5589fcfc9

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2ad5B_
Top template information
PDB header:ligase
Chain: B: PDB Molecule:ctp synthase;
PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution.
Confidence and coverage
Confidence:100.0% Coverage: 98%
536 residues ( 98% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEV
Secondary structure 























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Disorder  ????



































?


















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   .........70.........80.........90.........100.........110.........120
Sequence  FVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHIT
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Disorder 
























?




















?











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   .........130.........140.........150.........160.........170.........180
Sequence  NAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYM
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   .........190.........200.........210.........220.........230.........240
Sequence  AASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKD
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Disorder  ??????




























??






















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   .........250.........260.........270.........280.........290.........300
Sequence  VDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIE
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Disorder 
























??

















??












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   .........310.........320.........330.........340.........350.........360
Sequence  LPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEG
Secondary structure 























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?


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   .........370.........380.........390.........400.........410.........420
Sequence  MITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWR
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????
?
?












?
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   .........430.........440.........450.........460.........470.........480
Sequence  DENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQ
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Disorder 
????????????????










































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   .........490.........500.........510.........520.........530.........540
Sequence  IEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQ
Secondary structure 























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?














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   .....
Sequence  KRQAK
Secondary structure 

SS confidence 




Disorder 
????
Disorder confidence 




 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2ad5 chain B

3D model

Region: 1 - 545
Aligned: 536
Modelled: 536
Confidence: 100.0%
Identity: 99%
PDB header:ligase
Chain: B: PDB Molecule:ctp synthase;
PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution.

Phyre2

PDB 3nva chain B

3D model

Region: 2 - 537
Aligned: 525
Modelled: 536
Confidence: 100.0%
Identity: 49%
PDB header:ligase
Chain: B: PDB Molecule:ctp synthase;
PDBTitle: dimeric form of ctp synthase from sulfolobus solfataricus

Phyre2

PDB 1vcn chain A

3D model

Region: 2 - 540
Aligned: 502
Modelled: 518
Confidence: 100.0%
Identity: 54%
PDB header:ligase
Chain: A: PDB Molecule:ctp synthetase;
PDBTitle: crystal structure of t.th. hb8 ctp synthetase complex with sulfate2 anion

Phyre2

PDB 1s1m chain A domain 2

3D model

Region: 1 - 266
Aligned: 266
Modelled: 266
Confidence: 100.0%
Identity: 100%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Nitrogenase iron protein-like

Phyre2

PDB 1vco chain A domain 2

3D model

Region: 2 - 271
Aligned: 270
Modelled: 270
Confidence: 100.0%
Identity: 59%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Nitrogenase iron protein-like

Phyre2

PDB 2vo1 chain A domain 1

3D model

Region: 3 - 267
Aligned: 225
Modelled: 225
Confidence: 100.0%
Identity: 54%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Nitrogenase iron protein-like

Phyre2

PDB 2v4u chain A

3D model

Region: 288 - 545
Aligned: 246
Modelled: 258
Confidence: 100.0%
Identity: 46%
PDB header:ligase
Chain: A: PDB Molecule:ctp synthase 2;
PDBTitle: human ctp synthetase 2 - glutaminase domain in complex with2 5-oxo-l-norleucine

Phyre2

PDB 1s1m chain A domain 1

3D model

Region: 288 - 544
Aligned: 247
Modelled: 257
Confidence: 100.0%
Identity: 99%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 2w7t chain A

3D model

Region: 289 - 545
Aligned: 244
Modelled: 257
Confidence: 100.0%
Identity: 41%
PDB header:ligase
Chain: A: PDB Molecule:putative cytidine triphosphate synthase;
PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin

Phyre2

PDB 1vco chain A domain 1

3D model

Region: 287 - 540
Aligned: 236
Modelled: 254
Confidence: 100.0%
Identity: 48%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 3fij chain D

3D model

Region: 292 - 538
Aligned: 198
Modelled: 218
Confidence: 100.0%
Identity: 21%
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:lin1909 protein;
PDBTitle: crystal structure of a uncharacterized protein lin1909

Phyre2

PDB 1a9x chain B domain 2

3D model

Region: 285 - 541
Aligned: 189
Modelled: 218
Confidence: 99.9%
Identity: 22%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 1kee chain H

3D model

Region: 191 - 541
Aligned: 261
Modelled: 283
Confidence: 99.9%
Identity: 21%
PDB header:ligase
Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain;
PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin

Phyre2

PDB 2a9v chain A domain 1

3D model

Region: 291 - 545
Aligned: 192
Modelled: 208
Confidence: 99.9%
Identity: 24%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 1i7q chain B

3D model

Region: 291 - 537
Aligned: 188
Modelled: 208
Confidence: 99.9%
Identity: 19%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 1gpm chain D

3D model

Region: 296 - 534
Aligned: 184
Modelled: 187
Confidence: 99.9%
Identity: 23%
PDB header:transferase (glutamine amidotransferase)
Chain: D: PDB Molecule:gmp synthetase;
PDBTitle: escherichia coli gmp synthetase complexed with amp and pyrophosphate

Phyre2

PDB 1wl8 chain A domain 1

3D model

Region: 291 - 536
Aligned: 183
Modelled: 206
Confidence: 99.9%
Identity: 24%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 1gpm chain A domain 2

3D model

Region: 288 - 534
Aligned: 187
Modelled: 207
Confidence: 99.9%
Identity: 24%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 1qdl chain B

3D model

Region: 291 - 535
Aligned: 186
Modelled: 205
Confidence: 99.9%
Identity: 22%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2

PDB 1l9x chain A

3D model

Region: 291 - 526
Aligned: 200
Modelled: 208
Confidence: 99.9%
Identity: 19%
Fold: Flavodoxin-like
Superfamily: Class I glutamine amidotransferase-like
Family: Class I glutamine amidotransferases (GAT)

Phyre2
1

c2ad5B_
2

c3nvaB_
3

c1vcnA_
4

d1s1ma2
5

d1vcoa2
6

d2vo1a1
7

c2v4uA_
8

d1s1ma1
9

c2w7tA_
10

d1vcoa1
11

c3fijD_
12

d1a9xb2
13

c1keeH_
14

d2a9va1
15

d1i7qb_
16

c1gpmD_
17

d1wl8a1
18

d1gpma2
19

d1qdlb_
20

d1l9xa_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2ad5B_



100.0 99 PDB header:ligase
Chain: B: PDB Molecule:ctp synthase;
PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution.
2c3nvaB_



100.0 49 PDB header:ligase
Chain: B: PDB Molecule:ctp synthase;
PDBTitle: dimeric form of ctp synthase from sulfolobus solfataricus
3c1vcnA_



100.0 54 PDB header:ligase
Chain: A: PDB Molecule:ctp synthetase;
PDBTitle: crystal structure of t.th. hb8 ctp synthetase complex with sulfate2 anion
4d1s1ma2



100.0 100 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
5d1vcoa2



100.0 59 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
6d2vo1a1



100.0 54 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
7c2v4uA_



100.0 46 PDB header:ligase
Chain: A: PDB Molecule:ctp synthase 2;
PDBTitle: human ctp synthetase 2 - glutaminase domain in complex with2 5-oxo-l-norleucine
8d1s1ma1



100.0 99 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
9c2w7tA_



100.0 41 PDB header:ligase
Chain: A: PDB Molecule:putative cytidine triphosphate synthase;
PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin
10d1vcoa1



100.0 48 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
11c3fijD_



100.0 21 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:lin1909 protein;
PDBTitle: crystal structure of a uncharacterized protein lin1909
12d1a9xb2



99.9 22 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
13c1keeH_



99.9 21 PDB header:ligase
Chain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain;
PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
14d2a9va1



99.9 24 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
15d1i7qb_



99.9 19 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
16c1gpmD_



99.9 23 PDB header:transferase (glutamine amidotransferase)
Chain: D: PDB Molecule:gmp synthetase;
PDBTitle: escherichia coli gmp synthetase complexed with amp and pyrophosphate
17d1wl8a1



99.9 24 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
18d1gpma2



99.9 24 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
19d1qdlb_



99.9 22 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
20d1l9xa_



99.9 19 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
21c1l9xA_



not modelled 99.9 19 PDB header:hydrolase
Chain: A: PDB Molecule:gamma-glutamyl hydrolase;
PDBTitle: structure of gamma-glutamyl hydrolase
22c2ywcC_



not modelled 99.9 24 PDB header:ligase
Chain: C: PDB Molecule:gmp synthase [glutamine-hydrolyzing];
PDBTitle: crystal structure of gmp synthetase from thermus thermophilus in2 complex with xmp
23d1i1qb_



not modelled 99.9 19 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
24d2nv0a1



not modelled 99.9 23 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
25c2vxoB_



not modelled 99.9 24 PDB header:ligase
Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing];
PDBTitle: human gmp synthetase in complex with xmp
26c3uowB_



not modelled 99.9 17 PDB header:ligase
Chain: B: PDB Molecule:gmp synthetase;
PDBTitle: crystal structure of pf10_0123, a gmp synthetase from plasmodium2 falciparum
27c2vpiA_



not modelled 99.9 23 PDB header:ligase
Chain: A: PDB Molecule:gmp synthase;
PDBTitle: human gmp synthetase - glutaminase domain
28d1k9vf_



not modelled 99.9 20 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
29d1q7ra_



not modelled 99.9 22 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
30c1jvnB_



not modelled 99.9 23 PDB header:transferase
Chain: B: PDB Molecule:bifunctional histidine biosynthesis protein hishf;
PDBTitle: crystal structure of imidazole glycerol phosphate synthase: a tunnel2 through a (beta/alpha)8 barrel joins two active sites
31c3tqiB_



not modelled 99.9 27 PDB header:ligase
Chain: B: PDB Molecule:gmp synthase [glutamine-hydrolyzing];
PDBTitle: structure of the gmp synthase (guaa) from coxiella burnetii
32c2issF_



not modelled 99.8 21 PDB header:lyase, transferase
Chain: F: PDB Molecule:glutamine amidotransferase subunit pdxt;
PDBTitle: structure of the plp synthase holoenzyme from thermotoga maritima
33c2ywjA_



not modelled 99.8 26 PDB header:transferase
Chain: A: PDB Molecule:glutamine amidotransferase subunit pdxt;
PDBTitle: crystal structure of uncharacterized conserved protein from2 methanocaldococcus jannaschii
34d1t3ta2



not modelled 99.8 16 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
35d2abwa1



not modelled 99.8 17 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
36c3d54D_



not modelled 99.8 18 PDB header:ligase
Chain: D: PDB Molecule:phosphoribosylformylglycinamidine synthase 1;
PDBTitle: stucture of purlqs from thermotoga maritima
37c3r74B_



not modelled 99.8 20 PDB header:lyase, biosynthetic protein
Chain: B: PDB Molecule:anthranilate/para-aminobenzoate synthases component i;
PDBTitle: crystal structure of 2-amino-2-desoxyisochorismate synthase (adic)2 synthase phze from burkholderia lata 383
38d1jvna2



not modelled 99.8 21 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
39d1ka9h_



not modelled 99.8 22 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
40c2ywdA_



not modelled 99.8 29 PDB header:transferase
Chain: A: PDB Molecule:glutamine amidotransferase subunit pdxt;
PDBTitle: crystal structure of glutamine amidotransferase
41c3l7nA_



not modelled 99.8 21 PDB header:transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of smu.1228c
42c3l83A_



not modelled 99.8 15 PDB header:transferase
Chain: A: PDB Molecule:glutamine amido transferase;
PDBTitle: crystal structure of glutamine amido transferase from methylobacillus2 flagellatus
43d1o1ya_



not modelled 99.7 20 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Class I glutamine amidotransferases (GAT)
44d2ghra1



not modelled 99.6 14 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:HTS-like
45c2h2wA_



not modelled 99.5 15 PDB header:transferase
Chain: A: PDB Molecule:homoserine o-succinyltransferase;
PDBTitle: crystal structure of homoserine o-succinyltransferase (ec 2.3.1.46)2 (homoserine o-transsuccinylase) (hts) (tm0881) from thermotoga3 maritima at 2.52 a resolution
46c1t3tA_



not modelled 98.4 19 PDB header:ligase
Chain: A: PDB Molecule:phosphoribosylformylglycinamidine synthase;
PDBTitle: structure of formylglycinamide synthetase
47c3of5A_



not modelled 97.4 15 PDB header:ligase
Chain: A: PDB Molecule:dethiobiotin synthetase;
PDBTitle: crystal structure of a dethiobiotin synthetase from francisella2 tularensis subsp. tularensis schu s4
48d1byia_



not modelled 97.3 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
49c2qmoA_



not modelled 96.9 16 PDB header:ligase
Chain: A: PDB Molecule:dethiobiotin synthetase;
PDBTitle: crystal structure of dethiobiotin synthetase (biod) from helicobacter2 pylori
50c3l4eA_



not modelled 96.9 16 PDB header:hydrolase
Chain: A: PDB Molecule:uncharacterized peptidase lmo0363;
PDBTitle: 1.5a crystal structure of a putative peptidase e protein from listeria2 monocytogenes egd-e
51c1sy7B_



not modelled 96.5 14 PDB header:oxidoreductase
Chain: B: PDB Molecule:catalase 1;
PDBTitle: crystal structure of the catalase-1 from neurospora crassa, native2 structure at 1.75a resolution.
52c3fmfA_



not modelled 96.4 16 PDB header:ligase
Chain: A: PDB Molecule:dethiobiotin synthetase;
PDBTitle: crystal structure of mycobacterium tuberculosis dethiobiotin2 synthetase complexed with 7,8 diaminopelargonic acid carbamate
53c3cioA_



not modelled 96.1 20 PDB header:signaling protein, transferase
Chain: A: PDB Molecule:tyrosine-protein kinase etk;
PDBTitle: the kinase domain of escherichia coli tyrosine kinase etk
54c3uk7B_



not modelled 96.1 24 PDB header:transferase
Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing
PDBTitle: crystal structure of arabidopsis thaliana dj-1d
55d1fyea_



not modelled 96.1 19 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Aspartyl dipeptidase PepE
56d1p80a1



not modelled 96.1 14 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Catalase, C-terminal domain
57c3cneD_



not modelled 95.9 15 PDB header:hydrolase
Chain: D: PDB Molecule:putative protease i;
PDBTitle: crystal structure of the putative protease i from bacteroides2 thetaiotaomicron
58c3ibgF_



not modelled 95.9 20 PDB header:hydrolase
Chain: F: PDB Molecule:atpase, subunit of the get complex;
PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp
59d1p5fa_



not modelled 95.7 10 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
60d1sy7a1



not modelled 95.6 12 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:Catalase, C-terminal domain
61c3n7tA_



not modelled 95.6 17 PDB header:protein binding
Chain: A: PDB Molecule:macrophage binding protein;
PDBTitle: crystal structure of a macrophage binding protein from coccidioides2 immitis
62c3kklA_



not modelled 95.5 18 PDB header:hydrolase
Chain: A: PDB Molecule:probable chaperone protein hsp33;
PDBTitle: crystal structure of functionally unknown hsp33 from2 saccharomyces cerevisiae
63c3l3bA_



not modelled 95.4 20 PDB header:biosynthetic protein
Chain: A: PDB Molecule:es1 family protein;
PDBTitle: crystal structure of isoprenoid biosynthesis protein with2 amidotransferase-like domain from ehrlichia chaffeensis at 1.90a3 resolution
64d1vhqa_



not modelled 95.4 24 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
65d1iona_



not modelled 95.4 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
66d1qvwa_



not modelled 95.3 11 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
67c3nooB_



not modelled 95.0 19 PDB header:lyase
Chain: B: PDB Molecule:thij/pfpi family protein;
PDBTitle: crystal structure of c101a isocyanide hydratase from pseudomonas2 fluorescens
68d1g2ia_



not modelled 94.9 24 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
69c3fseB_



not modelled 94.7 24 PDB header:hydrolase
Chain: B: PDB Molecule:two-domain protein containing dj-1/thij/pfpi-like and
PDBTitle: crystal structure of a two-domain protein containing dj-1/thij/pfpi-2 like and ferritin-like domains (ava_4496) from anabaena variabilis3 atcc 29413 at 1.90 a resolution
70c3graA_



not modelled 94.5 13 PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, arac family;
PDBTitle: crystal structure of arac family transcriptional regulator from2 pseudomonas putida
71d1g3qa_



not modelled 94.2 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
72d1oi4a1



not modelled 94.1 35 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
73c2ph1A_



not modelled 94.0 16 PDB header:ligand binding protein
Chain: A: PDB Molecule:nucleotide-binding protein;
PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165
74c2j7pA_



not modelled 94.0 22 PDB header:signal recognition
Chain: A: PDB Molecule:signal recognition particle protein;
PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
75d1u9ca_



not modelled 94.0 22 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
76c1ii0A_



not modelled 93.9 33 PDB header:hydrolase
Chain: A: PDB Molecule:arsenical pump-driving atpase;
PDBTitle: crystal structure of the escherichia coli arsenite-translocating2 atpase
77c2wojD_



not modelled 93.9 17 PDB header:hydrolase
Chain: D: PDB Molecule:atpase get3;
PDBTitle: adp-alf4 complex of s. cerevisiae get3
78d1n57a_



not modelled 93.8 27 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
79c3zq6D_



not modelled 93.8 28 PDB header:hydrolase
Chain: D: PDB Molecule:putative arsenical pump-driving atpase;
PDBTitle: adp-alf4 complex of m. therm. trc40
80c3ug7D_



not modelled 93.7 38 PDB header:hydrolase
Chain: D: PDB Molecule:arsenical pump-driving atpase;
PDBTitle: crystal structure of get3 from methanocaldococcus jannaschii
81d1tjya_



not modelled 93.5 19 Fold:Periplasmic binding protein-like I
Superfamily:Periplasmic binding protein-like I
Family:L-arabinose binding protein-like
82c3f5dA_



not modelled 93.4 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein ydea;
PDBTitle: crystal structure of a protein of unknown function from2 bacillus subtilis
83c3endA_



not modelled 93.0 26 PDB header:oxidoreductase
Chain: A: PDB Molecule:light-independent protochlorophyllide reductase
PDBTitle: crystal structure of the l protein of rhodobacter2 sphaeroides light-independent protochlorophyllide3 reductase (bchl) with mgadp bound: a homologue of the4 nitrogenase fe protein
84c2an1D_



not modelled 92.9 30 PDB header:transferase
Chain: D: PDB Molecule:putative kinase;
PDBTitle: structural genomics, the crystal structure of a putative kinase from2 salmonella typhimurim lt2
85d2afhe1



not modelled 92.9 29 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
86c1hyqA_



not modelled 92.8 33 PDB header:cell cycle
Chain: A: PDB Molecule:cell division inhibitor (mind-1);
PDBTitle: mind bacterial cell division regulator from a. fulgidus
87d1hyqa_



not modelled 92.8 33 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
88c2bekB_



not modelled 92.5 30 PDB header:chromosome segregation
Chain: B: PDB Molecule:segregation protein;
PDBTitle: structure of the bacterial chromosome segregation protein2 soj
89c3k9cA_



not modelled 92.4 16 PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulator, laci family protein;
PDBTitle: crystal structure of laci transcriptional regulator from rhodococcus2 species.
90c2wooC_



not modelled 91.9 30 PDB header:hydrolase
Chain: C: PDB Molecule:atpase get3;
PDBTitle: nucleotide-free form of s. pombe get3
91c3brsA_



not modelled 91.7 12 PDB header:transport protein
Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator;
PDBTitle: crystal structure of sugar transporter from clostridium2 phytofermentans
92c3er6D_



not modelled 91.6 8 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative transcriptional regulator protein;
PDBTitle: crystal structure of a putative transcriptional regulator2 protein from vibrio parahaemolyticus
93c3efeC_



not modelled 91.5 16 PDB header:chaperone
Chain: C: PDB Molecule:thij/pfpi family protein;
PDBTitle: the crystal structure of the thij/pfpi family protein from bacillus2 anthracis
94d1xjca_



not modelled 91.5 26 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
95c3q9lB_



not modelled 91.4 23 PDB header:cell cycle, hydrolase
Chain: B: PDB Molecule:septum site-determining protein mind;
PDBTitle: the structure of the dimeric e.coli mind-atp complex
96c3bhnA_



not modelled 91.4 19 PDB header:unknown function
Chain: A: PDB Molecule:thij/pfpi domain protein;
PDBTitle: crystal structure of a dj-1/pfpi-like protein (shew_2856) from2 shewanella loihica pv-4 at 1.76 a resolution
97c3k9gA_



not modelled 91.3 22 PDB header:biosynthetic protein
Chain: A: PDB Molecule:pf-32 protein;
PDBTitle: crystal structure of a plasmid partition protein from borrelia2 burgdorferi at 2.25a resolution, iodide soak
98d2ab0a1



not modelled 91.2 20 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
99d1cp2a_



not modelled 90.8 26 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
100c2xj9B_



not modelled 90.6 25 PDB header:replication
Chain: B: PDB Molecule:mipz;
PDBTitle: dimer structure of the bacterial cell division regulator mipz
101d8abpa_



not modelled 90.5 10 Fold:Periplasmic binding protein-like I
Superfamily:Periplasmic binding protein-like I
Family:L-arabinose binding protein-like
102c1p81A_



not modelled 90.3 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:catalase hpii;
PDBTitle: crystal structure of the d181e variant of catalase hpii2 from e. coli
103c3ot1B_



not modelled 90.2 17 PDB header:structural genomics
Chain: B: PDB Molecule:4-methyl-5(b-hydroxyethyl)-thiazole monophosphate
PDBTitle: crystal structure of vc2308 protein
104c2qy9A_



not modelled 90.0 24 PDB header:protein transport
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
105c3io3A_



not modelled 89.8 30 PDB header:chaperone
Chain: A: PDB Molecule:deha2d07832p;
PDBTitle: get3 with adp from d. hansenii in closed form
106c3dmdA_



not modelled 89.7 31 PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle receptor;
PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
107d2fexa1



not modelled 89.6 20 Fold:Flavodoxin-like
Superfamily:Class I glutamine amidotransferase-like
Family:DJ-1/PfpI
108c3ewnA_



not modelled 89.3 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:thij/pfpi family protein;
PDBTitle: crystal structure of a thij/pfpi family protein from pseudomonas2 syringae
109d1sq5a_



not modelled 89.1 26 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
110d1rz3a_



not modelled 88.8 28 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
111c2vedA_



not modelled 88.7 24 PDB header:transferase
Chain: A: PDB Molecule:membrane protein capa1, protein tyrosine kinase;
PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein
112c2og2A_



not modelled 88.6 29 PDB header:protein transport
Chain: A: PDB Molecule:putative signal recognition particle receptor;
PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana
113c3kjgB_



not modelled 88.3 32 PDB header:hydrolase, metal binding protein
Chain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase complex, accessory
PDBTitle: adp-bound state of cooc1
114c3lv8A_



not modelled 88.3 19 PDB header:transferase
Chain: A: PDB Molecule:thymidylate kinase;
PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
115d1ihua2



not modelled 88.3 29 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
116c3en0A_



not modelled 88.0 14 PDB header:hydrolase
Chain: A: PDB Molecule:cyanophycinase;
PDBTitle: the structure of cyanophycinase
117c2f1rA_



not modelled 87.9 26 PDB header:biosynthetic protein
Chain: A: PDB Molecule:molybdopterin-guanine dinucleotide biosynthesis
PDBTitle: crystal structure of molybdopterin-guanine biosynthesis2 protein b (mobb)
118c3b9qA_



not modelled 87.8 29 PDB header:protein transport
Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit
PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana
119d1ihua1



not modelled 87.7 33 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
120c1vmaA_



not modelled 87.7 29 PDB header:protein transport
Chain: A: PDB Molecule:cell division protein ftsy;
PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction 

Transmembrane helices have been predicted in your sequence to adopt the topology shown below



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0