PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3l3bA_

Fold library id	PDB Header	Molecule	Title
c3l3bA_	PDB header: biosynthetic protein	Chain: A: PDB Molecule: es1 family protein;	PDBTitle: crystal structure of isoprenoid biosynthesis protein with2 amidotransferase-like domain from ehrlichia chaffeensis at3 1.90a resolution

Links to external resources
Added to library: Sat Aug 28 21:55:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L N S A V I L A G C G H M D G S E I R E A V L V M L E L D R H N V N F K C F A P N K N Q K Q V V D H K K K E S V G E V R N I L V E S A R I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T S
T T
S S B
S
T T T T S
B T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R G S V Y D I E Q I R V E E F D M L V I P G G Y G V A K N F S N L F D E D N D Y I L P E F K N A V R E F Y N A K K P I G A V C I S P A V V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
G G G
S
B S T T S
B
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L L K D I A K V K V T I G E L I D K M G G V H V D C P T I K S V K D D V N R I F S C S A Y M R N D S L Y N V Y L G I Q D M I S S M V N Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T
T T
T T T T
G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	N	S	A	V	I	L	A	G	C	G	H	M	D	G	S	E	I	R	E	A	V	L	V	M	L	E	L	D	R	H	N	V	N	F	K	C	F	A	P	N	K	N	Q	K	Q	V	V	D	H	K	K	K	E	S	V	G	E	V	R	N	I	L	V	E	S	A	R	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	T	T	T	S																T	T									S	S	B		S					T	T	T	T				S				B									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	G	S	V	Y	D	I	E	Q	I	R	V	E	E	F	D	M	L	V	I	P	G	G	Y	G	V	A	K	N	F	S	N	L	F	D	E	D	N	D	Y	I	L	P	E	F	K	N	A	V	R	E	F	Y	N	A	K	K	P	I	G	A	V	C	I	S	P	A	V	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					G	G	G			G	G	G		S															B	S	T	T	S						B														T	T							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	L	K	D	I	A	K	V	K	V	T	I	G	E	L	I	D	K	M	G	G	V	H	V	D	C	P	T	I	K	S	V	K	D	D	V	N	R	I	F	S	C	S	A	Y	M	R	N	D	S	L	Y	N	V	Y	L	G	I	Q	D	M	I	S	S	M	V	N	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T															T								T	T						T	T	T	T						G	G	G	S