PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2vedA_

Fold library id	PDB Header	Molecule	Title
c2vedA_	PDB header: transferase	Chain: A: PDB Molecule: membrane protein capa1, protein tyrosine kinase;	PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein

Links to external resources
Added to library: Tue Mar 16 12:11:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D K R I K D E E D V E K E L G L P V L G S I Q K F N M T N T R R S T S S L I V H E Q P K S P I S E K F R G I R S N I M F A N P D S A V Q S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T T T T S
S S S
S T T S T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V I T S E A P G A G M S T I A A N L A V A Y A Q A G Y K T L I V D G D M R K P T Q H Y I F N L P N N E G L S S L L L N W S T Y Q D S I I S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S S T T
S S S
T T
S S S T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E I E D L D V L T S G P I P P N P S E L I T S R A F A N L Y D T L L M N Y N F V I I D T P P V N T V T D A Q L F S K F T G N V V Y V V N S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T
S
S
T S
S
T T T
T S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . .

Sequence N N N K D E V K K G K E L I E A T G A K L L G V V L N R M P K D K S A S Y Y A Y Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	K	R	I	K	D	E	E	D	V	E	K	E	L	G	L	P	V	L	G	S	I	Q	K	F	N	M	T	N	T	R	R	S	T	S	S	L	I	V	H	E	Q	P	K	S	P	I	S	E	K	F	R	G	I	R	S	N	I	M	F	A	N	P	D	S	A	V	Q	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S																					T	T	T	T	T	S		S	S	S						S	T	T	S																T	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	I	T	S	E	A	P	G	A	G	M	S	T	I	A	A	N	L	A	V	A	Y	A	Q	A	G	Y	K	T	L	I	V	D	G	D	M	R	K	P	T	Q	H	Y	I	F	N	L	P	N	N	E	G	L	S	S	L	L	L	N	W	S	T	Y	Q	D	S	I	I	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	T	T	S	S															T	T										S	S	S							T	T				S	S	S						T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	I	E	D	L	D	V	L	T	S	G	P	I	P	P	N	P	S	E	L	I	T	S	R	A	F	A	N	L	Y	D	T	L	L	M	N	Y	N	F	V	I	I	D	T	P	P	V	N	T	V	T	D	A	Q	L	F	S	K	F	T	G	N	V	V	Y	V	V	N	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T								S			S							T	S															S									T	T	T		T										S								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Sequence	N	N	N	K	D	E	V	K	K	G	K	E	L	I	E	A	T	G	A	K	L	L	G	V	V	L	N	R	M	P	K	D	K	S	A	S	Y	Y	A	Y	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T	T																	S	S	T	T