PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3fseB_

Fold library id	PDB Header	Molecule	Title
c3fseB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: two-domain protein containing dj-1/thij/pfpi-	PDBTitle: crystal structure of two-domain protein containing dj-2 1/thij/pfpi-like and ferritin-like domains. (yp_324989.1)3 from anabaena variabilis atcc 29413 at 1.90 a resolution

Links to external resources
Added to library: Tue Mar 16 13:08:48 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K K K V A I L I E Q A V E D T E F I I P C N G L K Q A G F E V V V L G S R X N E K Y K G K R G R L S T Q A D G T T T E A I A S E F D A V V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T B
T T
S S T T
B T T S
S T T T
G G G
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P G G X A P D K X R R N P N T V R F V Q E A X E Q G K L V A A V H G P Q V L I E G D L L R G K Q A T G F I A I S K D X X N A G A D Y L D E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T
T T
T T T
T T
G G G T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V V D G N L I T S R E P G D L A I F T T A I L S R L G Y G G A L P D E K D R N A E W W K L A D A W G G S T K G D I V R G L N T A L G G E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S G G G T T
T T
S S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Y S L E A L E K Y T E K E S D V E A K A L F Q E X I T N K Q R H I E Y L E T Y L T R L G E K P S L S A N I A N Q Y A K V K T A L T G S D D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . .

Sequence Y Q I R S A L G D I Q T G I G D I G N L C A X Y T D P I A T A I F K E I Y K D L V K Y E Q R L V S L Y R T R T N A T V Q P P K P T T G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	K	V	A	I	L	I	E	Q	A	V	E	D	T	E	F	I	I	P	C	N	G	L	K	Q	A	G	F	E	V	V	V	L	G	S	R	X	N	E	K	Y	K	G	K	R	G	R	L	S	T	Q	A	D	G	T	T	T	E	A	I	A	S	E	F	D	A	V	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	B															T	T								S	S	T	T					B	T	T	S							S			T	T	T			G	G	G		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	G	G	X	A	P	D	K	X	R	R	N	P	N	T	V	R	F	V	Q	E	A	X	E	Q	G	K	L	V	A	A	V	H	G	P	Q	V	L	I	E	G	D	L	L	R	G	K	Q	A	T	G	F	I	A	I	S	K	D	X	X	N	A	G	A	D	Y	L	D	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	T						T	T														T	T								T							T	T			T	T							G	G	G							T	T							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	V	D	G	N	L	I	T	S	R	E	P	G	D	L	A	I	F	T	T	A	I	L	S	R	L	G	Y	G	G	A	L	P	D	E	K	D	R	N	A	E	W	W	K	L	A	D	A	W	G	G	S	T	K	G	D	I	V	R	G	L	N	T	A	L	G	G	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T						S	G	G	G												T	T								T	T		S	S										T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	S	L	E	A	L	E	K	Y	T	E	K	E	S	D	V	E	A	K	A	L	F	Q	E	X	I	T	N	K	Q	R	H	I	E	Y	L	E	T	Y	L	T	R	L	G	E	K	P	S	L	S	A	N	I	A	N	Q	Y	A	K	V	K	T	A	L	T	G	S	D	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S																												T	T												T	T	T					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Sequence	Y	Q	I	R	S	A	L	G	D	I	Q	T	G	I	G	D	I	G	N	L	C	A	X	Y	T	D	P	I	A	T	A	I	F	K	E	I	Y	K	D	L	V	K	Y	E	Q	R	L	V	S	L	Y	R	T	R	T	N	A	T	V	Q	P	P	K	P	T	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	T		S																															S	S	S							S	S