Email l.a.kelley@imperial.ac.uk Description P45465 Date Thu Jan 5 12:02:42 GMT 2012 Unique Job ID bc550198f9006420

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3fovA_ 100.0 37 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0102 protein rpa0323; PDBTitle: crystal structure of protein rpa0323 of unknown function from2 rhodopseudomonas palustris 2 d1gefa_ 97.8 22 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 3 d1ob8a_ 97.3 21 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 4 c2wj0B_ 96.8 21 PDB header:hydrolase/dna Chain: B: PDB Molecule:archaeal hjc; PDBTitle: crystal structures of holliday junction resolvases from2 archaeoglobus fulgidus bound to dna substrate 5 d1hh1a_ 96.3 23 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hjc-like 6 c1y88A_ 95.9 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein af1548; PDBTitle: crystal structure of protein of unknown function af1548 7 d1y88a2 95.9 24 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:MRR-like 8 c2vldA_ 93.3 17 PDB header:hydrolase Chain: A: PDB Molecule:upf0286 protein pyrab01260; PDBTitle: crystal structure of a repair endonuclease from pyrococcus2 abyssi 9 c3dnxA_ 92.1 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein spo1766; PDBTitle: spo1766 protein of unknown function from silicibacter pomeroyi. 10 d1xmxa_ 92.0 17 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Hypothetical protein VC1899 11 d2inba1 90.5 19 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:XisH-like 12 d2okfa1 89.7 16 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:XisH-like 13 d1cw0a_ 79.5 30 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Very short patch repair (VSR) endonuclease 14 d1w36b3 70.4 23 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Exodeoxyribonuclease V beta chain (RecB), C-terminal domain 15 d1e4ea2 68.0 16 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:ATP-binding domain of peptide synthetases 16 c1w36E_ 56.9 23 PDB header:recombination Chain: E: PDB Molecule:exodeoxyribonuclease v beta chain; PDBTitle: recbcd:dna complex 17 d1iowa2 51.3 13 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:ATP-binding domain of peptide synthetases 18 d1uc8a2 38.3 16 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Lysine biosynthesis enzyme LysX ATP-binding domain 19 d1vsra_ 32.8 28 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Very short patch repair (VSR) endonuclease 20 c3se7A_ 32.5 20 PDB header:ligase Chain: A: PDB Molecule:vana; PDBTitle: ancient vana 21 d2j9ga3 not modelled 25.6 21 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 22 c3tqtB_ not modelled 24.8 6 PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: structure of the d-alanine-d-alanine ligase from coxiella burnetii 23 d1kjqa3 not modelled 24.2 18 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 24 c3e5nA_ not modelled 23.4 11 PDB header:ligase Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: crystal strucutre of d-alanine-d-alanine ligase from2 xanthomonas oryzae pv. oryzae kacc10331 25 d1miua5 not modelled 21.6 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 26 d1ulza3 not modelled 20.4 14 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 27 c3bpqD_ not modelled 19.1 33 PDB header:toxin Chain: D: PDB Molecule:toxin rele3; PDBTitle: crystal structure of relb-rele antitoxin-toxin complex from2 methanococcus jannaschii 28 c3h1tA_ not modelled 18.5 18 PDB header:hydrolase Chain: A: PDB Molecule:type i site-specific restriction-modification PDBTitle: the fragment structure of a putative hsdr subunit of a type2 i restriction enzyme from vibrio vulnificus yj016 29 c2dlnA_ not modelled 17.6 13 PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution 30 d1ehia2 not modelled 17.5 11 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:ATP-binding domain of peptide synthetases 31 d1m0da_ not modelled 16.9 25 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Endonuclease I (Holliday junction resolvase) 32 d1tx3a1 not modelled 16.9 10 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:Restriction endonuclease HincII 33 d1y0ka1 not modelled 16.3 60 Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:PA4535-like 34 d1iyjb5 not modelled 15.9 14 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Single strand DNA-binding domain, SSB 35 d1puza_ not modelled 15.1 55 Fold:YgfY-like Superfamily:YgfY-like Family:YgfY-like 36 d1fy7a_ not modelled 14.9 16 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 37 c3i12A_ not modelled 14.9 15 PDB header:ligase Chain: A: PDB Molecule:d-alanine-d-alanine ligase a; PDBTitle: the crystal structure of the d-alanyl-alanine synthetase a from2 salmonella enterica subsp. enterica serovar typhimurium str. lt2 38 c1x6iB_ not modelled 14.4 36 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ygfy; PDBTitle: crystal structure of ygfy from escherichia coli 39 d3etja3 not modelled 14.1 10 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 40 c2jr5A_ not modelled 14.0 36 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0350 protein vc_2471; PDBTitle: solution structure of upf0350 protein vc_2471. northeast2 structural genomics target vcr36 41 d1j6ua1 not modelled 13.7 10 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 42 c2pvpB_ not modelled 13.3 5 PDB header:ligase Chain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori 43 c2cl2A_ not modelled 13.1 63 PDB header:hydrolase Chain: A: PDB Molecule:putative laminarinase; PDBTitle: endo-1,3(4)-beta-glucanase from phanerochaete chrysosporium,2 solved using native sulfur sad, exhibiting intact3 heptasaccharide glycosylation 44 d2ozua1 not modelled 13.0 22 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 45 d2fiwa1 not modelled 12.8 22 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 46 c3r23B_ not modelled 12.6 9 PDB header:ligase Chain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis 47 c2givA_ not modelled 12.3 22 PDB header:transferase Chain: A: PDB Molecule:probable histone acetyltransferase myst1; PDBTitle: human myst histone acetyltransferase 1 48 d2giva1 not modelled 12.3 22 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 49 d2r85a2 not modelled 11.6 13 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:PurP ATP-binding domain-like 50 d2r7ka2 not modelled 11.1 13 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:PurP ATP-binding domain-like 51 c1ulzA_ not modelled 11.1 14 PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase 52 d1xdfa1 not modelled 10.7 9 Fold:TBP-like Superfamily:Bet v1-like Family:Pathogenesis-related protein 10 (PR10)-like 53 c3hrlA_ not modelled 10.6 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:endonuclease-like protein; PDBTitle: crystal structure of a putative endonuclease-like protein (ngo0050)2 from neisseria gonorrhoeae 54 c2p0aA_ not modelled 9.9 13 PDB header:neuropeptide Chain: A: PDB Molecule:synapsin-3; PDBTitle: the crystal structure of human synapsin iii (syn3) in complex with2 amppnp 55 c2duwA_ not modelled 9.6 15 PDB header:ligand binding protein Chain: A: PDB Molecule:putative coa-binding protein; PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae 56 c3fqiA_ not modelled 9.6 17 PDB header:protein binding Chain: A: PDB Molecule:protein dom3z; PDBTitle: crystal structure of the mouse dom3z 57 c1uc8B_ not modelled 9.6 15 PDB header:biosynthetic protein Chain: B: PDB Molecule:lysine biosynthesis enzyme; PDBTitle: crystal structure of a lysine biosynthesis enzyme, lysx,2 from thermus thermophilus hb8 58 d1zhva2 not modelled 9.4 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:Atu0741-like 59 d2o8ra3 not modelled 9.3 36 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 60 d1p9oa_ not modelled 9.2 21 Fold:Ribokinase-like Superfamily:CoaB-like Family:CoaB-like 61 c3u9sE_ not modelled 9.1 23 PDB header:ligase Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex 62 d2jfga1 not modelled 9.1 11 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 63 c1ehiB_ not modelled 9.0 13 PDB header:ligase Chain: B: PDB Molecule:d-alanine:d-lactate ligase; PDBTitle: d-alanine:d-lactate ligase (lmddl2) of vancomycin-resistant2 leuconostoc mesenteroides 64 c2k7hA_ not modelled 8.7 12 PDB header:allergen Chain: A: PDB Molecule:stress-induced protein sam22; PDBTitle: nmr solution structure of soybean allergen gly m 4 65 c2ou2A_ not modelled 8.6 26 PDB header:transferase Chain: A: PDB Molecule:histone acetyltransferase htatip; PDBTitle: acetyltransferase domain of human hiv-1 tat interacting2 protein, 60kda, isoform 3 66 d2naca2 not modelled 8.6 27 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain 67 d1p3da1 not modelled 8.3 18 Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain 68 c3uvzB_ not modelled 8.3 11 PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria 69 c3s5pA_ not modelled 8.2 8 PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia 70 c1e4eB_ not modelled 8.1 8 PDB header:ligase Chain: B: PDB Molecule:vancomycin/teicoplanin a-type resistance protein vana; PDBTitle: d-alanyl-d-lacate ligase 71 c3koxA_ not modelled 8.0 19 PDB header:metal binding protein Chain: A: PDB Molecule:d-ornithine aminomutase e component; PDBTitle: crystal structure of ornithine 4,5 aminomutase in complex with 2,4-2 diaminobutyrate (anaerobic) 72 c3dfuB_ not modelled 7.8 13 PDB header:oxidoreductase Chain: B: PDB Molecule:uncharacterized protein from 6-phosphogluconate PDBTitle: crystal structure of a putative rossmann-like dehydrogenase (cgl2689)2 from corynebacterium glutamicum at 2.07 a resolution 73 d1gsoa3 not modelled 7.8 19 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:BC ATP-binding domain-like 74 c3cqyA_ not modelled 7.7 19 PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1 75 d2jdca1 not modelled 7.6 10 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 76 c3orqA_ not modelled 7.5 6 PDB header:ligase,biosynthetic protein Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide synthetase; PDBTitle: crystal structure of n5-carboxyaminoimidazole synthetase from2 staphylococcus aureus complexed with adp 77 c3ey5A_ not modelled 7.3 5 PDB header:transferase Chain: A: PDB Molecule:acetyltransferase-like, gnat family; PDBTitle: putative acetyltransferase from gnat family from bacteroides2 thetaiotaomicron. 78 c3bt3B_ not modelled 7.3 15 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:glyoxalase-related enzyme, arac type; PDBTitle: crystal structure of a glyoxalase-related enzyme from clostridium2 phytofermentans 79 d1pk8a2 not modelled 7.3 13 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Synapsin C-terminal domain 80 c2x7bA_ not modelled 7.3 16 PDB header:transferase Chain: A: PDB Molecule:n-acetyltransferase sso0209; PDBTitle: crystal structure of the n-terminal acetylase ard1 from2 sulfolobus solfataricus p2 81 c3qbwA_ not modelled 7.2 17 PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate 82 c3g3oA_ not modelled 7.0 36 PDB header:biosynthetic protein Chain: A: PDB Molecule:vacuolar transporter chaperone 2; PDBTitle: crystal structure of the cytoplasmic tunnel domain in yeast2 vtc2p 83 c1y7eA_ not modelled 7.0 15 PDB header:hydrolase Chain: A: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: the crystal structure of aminopeptidase i from borrelia burgdorferi2 b31 84 d1u7za_ not modelled 6.9 17 Fold:Ribokinase-like Superfamily:CoaB-like Family:CoaB-like 85 c2i80B_ not modelled 6.5 11 PDB header:ligase Chain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies 86 c2qb5B_ not modelled 6.5 16 PDB header:transferase Chain: B: PDB Molecule:inositol-tetrakisphosphate 1-kinase; PDBTitle: crystal structure of human inositol 1,3,4-trisphosphate 5/6-kinase2 (itpk1) in complex with adp and mn2+ 87 c3g8cB_ not modelled 6.4 14 PDB header:ligase Chain: B: PDB Molecule:biotin carboxylase; PDBTitle: crystal stucture of biotin carboxylase in complex with2 biotin, bicarbonate, adp and mg ion 88 d1jiwi_ not modelled 6.3 23 Fold:Streptavidin-like Superfamily:beta-Barrel protease inhibitors Family:Metalloprotease inhibitor 89 c3gidB_ not modelled 6.2 22 PDB header:ligase Chain: B: PDB Molecule:acetyl-coa carboxylase 2; PDBTitle: the biotin carboxylase (bc) domain of human acetyl-coa2 carboxylase 2 (acc2) in complex with soraphen a 90 c3q2oB_ not modelled 6.2 9 PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of purk: n5-carboxyaminoimidazole ribonucleotide2 synthetase 91 c3ie5A_ not modelled 6.2 16 PDB header:plant protein, biosynthetic protein Chain: A: PDB Molecule:phenolic oxidative coupling protein hyp-1; PDBTitle: crystal structure of hyp-1 protein from hypericum perforatum2 (st john's wort) involved in hypericin biosynthesis 92 c2rdyB_ not modelled 6.2 24 PDB header:hydrolase Chain: B: PDB Molecule:bh0842 protein; PDBTitle: crystal structure of a putative glycoside hydrolase family2 protein from bacillus halodurans 93 d1jg5a_ not modelled 6.1 25 Fold:GTP cyclohydrolase I feedback regulatory protein, GFRP Superfamily:GTP cyclohydrolase I feedback regulatory protein, GFRP Family:GTP cyclohydrolase I feedback regulatory protein, GFRP 94 d1dcja_ not modelled 6.0 14 Fold:IF3-like Superfamily:SirA-like Family:SirA-like 95 c2pn1A_ not modelled 5.9 20 PDB header:ligase Chain: A: PDB Molecule:carbamoylphosphate synthase large subunit; PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution 96 c1pk8D_ not modelled 5.9 14 PDB header:membrane protein Chain: D: PDB Molecule:rat synapsin i; PDBTitle: crystal structure of rat synapsin i c domain complexed to2 ca.atp 97 c1upsB_ not modelled 5.9 50 PDB header:glycosyl hydrolase Chain: B: PDB Molecule:glcnac-alpha-1,4-gal-releasing endo-beta- PDBTitle: glcnac[alpha]1-4gal releasing endo-[beta]-galactosidase2 from clostridium perfringens 98 c1w96B_ not modelled 5.8 18 PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a 99 c3juuA_ not modelled 5.7 38 PDB header:hydrolase/carbohydrate Chain: A: PDB Molecule:porphyranase b; PDBTitle: crystal structure of porphyranase b (porb) from zobellia2 galactanivorans