PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3qbwA_

Fold library id	PDB Header	Molecule	Title
c3qbwA_	PDB header: transferase	Chain: A: PDB Molecule: anhydro-n-acetylmuramic acid kinase;	PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate

Links to external resources
Added to library: Sat Feb 5 08:43:26 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P R Y L G L M S G T S L D G M D I V L I E Q G D R T T L L A S H Y L P M P A G L R E D I L A L C V P G P D E I A R A A E V E Q R W V A L A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q G V R E L L L Q Q Q M S P D E V R A I G S H G Q T I R H E P A R H F T V Q I G N P A L L A E L T G I D V V A D F R R R D V A A G G Q G A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
G G G T
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V P A F H Q A L F S R A V L N I G G F S N V S L L R G F D C G P G N V L M D A W I H H Q R G E H F D R D G A W A A S G Q V N H A L L A S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
S S S
S S
G G G T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L A D E F F A A R G P K S T G R E R F N L P W L Q E H L A R H P A L P A A D I Q A T L L E L S A R S I S E S L L D A Q P D V L V C G G G A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
T T T S S T S S
S G G G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . .

Sequence N T A L M K R L A M L M P E A R V A S T D E Y G I P P A W M E G M A F A W L A H R F L E R L P G N C P D V T G A L G P R T L G A L Y P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G G T S
G G G T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	R	Y	L	G	L	M	S	G	T	S	L	D	G	M	D	I	V	L	I	E	Q	G	D	R	T	T	L	L	A	S	H	Y	L	P	M	P	A	G	L	R	E	D	I	L	A	L	C	V	P	G	P	D	E	I	A	R	A	A	E	V	E	Q	R	W	V	A	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S										S	S	S																							S	S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	G	V	R	E	L	L	L	Q	Q	Q	M	S	P	D	E	V	R	A	I	G	S	H	G	Q	T	I	R	H	E	P	A	R	H	F	T	V	Q	I	G	N	P	A	L	L	A	E	L	T	G	I	D	V	V	A	D	F	R	R	R	D	V	A	A	G	G	Q	G	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			G	G	G															G	G	G	T																S	S													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	P	A	F	H	Q	A	L	F	S	R	A	V	L	N	I	G	G	F	S	N	V	S	L	L	R	G	F	D	C	G	P	G	N	V	L	M	D	A	W	I	H	H	Q	R	G	E	H	F	D	R	D	G	A	W	A	A	S	G	Q	V	N	H	A	L	L	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																S	S															S	S												S		S	S		G	G	G					T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	A	D	E	F	F	A	A	R	G	P	K	S	T	G	R	E	R	F	N	L	P	W	L	Q	E	H	L	A	R	H	P	A	L	P	A	A	D	I	Q	A	T	L	L	E	L	S	A	R	S	I	S	E	S	L	L	D	A	Q	P	D	V	L	V	C	G	G	G	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S							S	S					T	T	T	S	S									T	S	S																																			S	G	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Sequence	N	T	A	L	M	K	R	L	A	M	L	M	P	E	A	R	V	A	S	T	D	E	Y	G	I	P	P	A	W	M	E	G	M	A	F	A	W	L	A	H	R	F	L	E	R	L	P	G	N	C	P	D	V	T	G	A	L	G	P	R	T	L	G	A	L	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S					G	G	G	G	T	S		G	G	G															T	T												S	S